RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C PGA3Q12746 312 aaKnown RBP3.37□□□□□ -1.87
ATG27YJL178C PMD1P32634 1753 aa3.36□□□□□ -1.87
ATG27YJL178C SNF3P10870 884 aa3.36□□□□□ -1.87
ATG27YJL178C KGD1P20967 1014 aaKnown RBP3.36□□□□□ -1.87
ATG27YJL178C SAN1P22470 610 aa3.36□□□□□ -1.87
ATG27YJL178C PRE8P23639 250 aa3.36□□□□□ -1.87
ATG27YJL178C VMA16P23968 213 aa3.36□□□□□ -1.87
ATG27YJL178C AUR1P36107 401 aaPredicted RBP3.36□□□□□ -1.87
ATG27YJL178C CCT4P39078 528 aaKnown RBP3.36□□□□□ -1.87
ATG27YJL178C PHO90P39535 881 aa3.36□□□□□ -1.87
ATG27YJL178C ELO1P39540 310 aa3.36□□□□□ -1.87
ATG27YJL178C MLC1P53141 149 aa3.36□□□□□ -1.87
ATG27YJL178C DUO1P53168 247 aaKnown RBP3.36□□□□□ -1.87
ATG27YJL178C CUL3P53202 744 aa3.36□□□□□ -1.87
ATG27YJL178C NUP100Q02629 959 aa3.36□□□□□ -1.87
ATG27YJL178C NGL3Q03210 505 aa3.36□□□□□ -1.87
ATG27YJL178C EMI2Q04409 500 aaKnown RBP3.36□□□□□ -1.87
ATG27YJL178C YMR317WQ04893 1140 aa3.36□□□□□ -1.87
ATG27YJL178C CTI6Q08923 506 aa3.36□□□□□ -1.87
ATG27YJL178C BSC1Q12140 328 aa3.36□□□□□ -1.87
ATG27YJL178C LSP1Q12230 341 aaKnown RBP3.36□□□□□ -1.87
ATG27YJL178C SPE4Q12455 300 aa3.36□□□□□ -1.87
ATG27YJL178C NKP1Q12493 238 aa3.36□□□□□ -1.87
ATG27YJL178C NCB2Q92317 146 aa3.36□□□□□ -1.87
ATG27YJL178C AAC3P18238 307 aa3.35□□□□□ -1.87
ATG27YJL178C POL4P25615 582 aa3.35□□□□□ -1.87
ATG27YJL178C PAH1P32567 862 aa3.35□□□□□ -1.87
ATG27YJL178C TSC10P38342 320 aa3.35□□□□□ -1.87
ATG27YJL178C YMR147WP40218 223 aaKnown RBP3.35□□□□□ -1.87
ATG27YJL178C FET5P43561 622 aa3.35□□□□□ -1.87
ATG27YJL178C ECM30Q06673 1274 aa3.35□□□□□ -1.87
ATG27YJL178C RDR1Q08904 546 aa3.35□□□□□ -1.87
ATG27YJL178C YBR126W-AQ8TGU7 68 aa3.35□□□□□ -1.87
ATG27YJL178C ARD1P07347 238 aaPredicted RBP3.34□□□□□ -1.87
ATG27YJL178C RNR2P09938 399 aaKnown RBP3.34□□□□□ -1.87
ATG27YJL178C GFD2P25370 566 aaKnown RBP3.34□□□□□ -1.87
ATG27YJL178C SYN8P31377 255 aa3.34□□□□□ -1.87
ATG27YJL178C DBP8P38719 431 aa3.34□□□□□ -1.87
ATG27YJL178C UBA4P38820 440 aa3.34□□□□□ -1.87
ATG27YJL178C YJL070CP40361 888 aa3.34□□□□□ -1.87
ATG27YJL178C SGM1P47166 707 aa3.34□□□□□ -1.87
ATG27YJL178C YGL260WP53056 76 aa3.34□□□□□ -1.87
ATG27YJL178C HOS2P53096 452 aaPredicted RBP3.34□□□□□ -1.87
ATG27YJL178C RSM23Q01163 450 aa3.34□□□□□ -1.87
ATG27YJL178C YML037CQ03703 340 aa3.34□□□□□ -1.87
ATG27YJL178C DPB4Q04603 196 aaKnown RBP3.34□□□□□ -1.87
ATG27YJL178C TEN1Q07921 160 aa3.34□□□□□ -1.87
ATG27YJL178C LEU9Q12166 604 aaKnown RBP3.34□□□□□ -1.87
ATG27YJL178C PHO2P07269 559 aa3.33□□□□□ -1.88
ATG27YJL178C BAR1P12630 587 aa3.33□□□□□ -1.88
ATG27YJL178C ADH7P25377 361 aa3.33□□□□□ -1.88
ATG27YJL178C SEC1P30619 724 aaKnown RBP3.33□□□□□ -1.88
ATG27YJL178C MIC60P36112 540 aa3.33□□□□□ -1.88
ATG27YJL178C AGP2P38090 596 aa3.33□□□□□ -1.88
ATG27YJL178C YBL029WP38201 376 aa3.33□□□□□ -1.88
ATG27YJL178C UPF3P48412 387 aaKnown RBP3.33□□□□□ -1.88
ATG27YJL178C ERG26P53199 349 aaKnown RBP3.33□□□□□ -1.88
ATG27YJL178C SOL4P53315 255 aa3.33□□□□□ -1.88
ATG27YJL178C YDR415CQ04033 374 aaPredicted RBP3.33□□□□□ -1.88
ATG27YJL178C YDL121CQ07541 149 aa3.33□□□□□ -1.88
ATG27YJL178C YPL272CQ08984 517 aa3.33□□□□□ -1.88
ATG27YJL178C SNU66Q12420 587 aaPredicted RBP3.33□□□□□ -1.88
ATG27YJL178C SAC3P46674 1301 aa3.33□□□□□ -1.88
ATG27YJL178C FAS2P19097 1887 aaKnown RBP3.33□□□□□ -1.88
ATG27YJL178C FRS2P15625 503 aaKnown RBP3.32□□□□□ -1.88
ATG27YJL178C CMK1P27466 446 aaKnown RBP3.32□□□□□ -1.88
ATG27YJL178C TRS65P32893 560 aa3.32□□□□□ -1.88
ATG27YJL178C FMP46P36141 133 aaKnown RBP3.32□□□□□ -1.88
ATG27YJL178C ROT2P38138 954 aa3.32□□□□□ -1.88
ATG27YJL178C ERG7P38604 731 aa3.32□□□□□ -1.88
ATG27YJL178C SPL2P38839 148 aa3.32□□□□□ -1.88
ATG27YJL178C NOP16P40007 231 aaKnown RBP3.32□□□□□ -1.88
ATG27YJL178C RSC1P53236 928 aa3.32□□□□□ -1.88
ATG27YJL178C HST1P53685 503 aa3.32□□□□□ -1.88
ATG27YJL178C MDG1P53885 366 aa3.32□□□□□ -1.88
ATG27YJL178C CRZ1P53968 678 aa3.32□□□□□ -1.88
ATG27YJL178C EFM6P53970 246 aa3.32□□□□□ -1.88
ATG27YJL178C LUC7Q07508 261 aaPredicted RBP3.32□□□□□ -1.88
ATG27YJL178C ETT1Q08421 412 aaKnown RBP3.32□□□□□ -1.88
ATG27YJL178C HUA2Q12134 243 aa3.32□□□□□ -1.88
ATG27YJL178C POM152P39685 1337 aa3.32□□□□□ -1.88
ATG27YJL178C PUT2P07275 575 aa3.31□□□□□ -1.88
ATG27YJL178C PMS1P14242 873 aa3.31□□□□□ -1.88
ATG27YJL178C COQ1P18900 473 aa3.31□□□□□ -1.88
ATG27YJL178C PUP3P25451 205 aaKnown RBP3.31□□□□□ -1.88
ATG27YJL178C YIH1P25637 258 aa3.31□□□□□ -1.88
ATG27YJL178C MCM4P30665 933 aaKnown RBP3.31□□□□□ -1.88
ATG27YJL178C IMP2'P32351 346 aa3.31□□□□□ -1.88
ATG27YJL178C PRX1P34227 261 aaKnown RBP3.31□□□□□ -1.88
ATG27YJL178C MTR2P34232 184 aaKnown RBP3.31□□□□□ -1.88
ATG27YJL178C UBP11P36026 717 aa3.31□□□□□ -1.88
ATG27YJL178C RIM2P38127 377 aa3.31□□□□□ -1.88
ATG27YJL178C AFG3P39925 761 aa3.31□□□□□ -1.88
ATG27YJL178C AZF1P41696 914 aa3.31□□□□□ -1.88
ATG27YJL178C EPL1P43572 832 aa3.31□□□□□ -1.88
ATG27YJL178C PYK2P52489 506 aaKnown RBP3.31□□□□□ -1.88
ATG27YJL178C RPT4P53549 437 aaKnown RBP3.31□□□□□ -1.88
ATG27YJL178C MSC1Q03104 513 aa3.31□□□□□ -1.88
ATG27YJL178C RPC11Q04307 110 aaPredicted RBP3.31□□□□□ -1.88
ATG27YJL178C BUD22Q04347 519 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms