RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C NFU1P32860 256 aa3.3□□□□□ -1.88
SHQ1YIL104C LTV1P34078 463 aa3.3□□□□□ -1.88
SHQ1YIL104C YKL151CP36059 337 aa3.3□□□□□ -1.88
SHQ1YIL104C STB6P36085 766 aa3.3□□□□□ -1.88
SHQ1YIL104C RPC37P36121 282 aa3.3□□□□□ -1.88
SHQ1YIL104C YBR062CP38239 180 aa3.3□□□□□ -1.88
SHQ1YIL104C YJL070CP40361 888 aa3.3□□□□□ -1.88
SHQ1YIL104C IME4P41833 600 aa3.3□□□□□ -1.88
SHQ1YIL104C SLS1P42900 643 aa3.3□□□□□ -1.88
SHQ1YIL104C PET130P47065 347 aa3.3□□□□□ -1.88
SHQ1YIL104C SPT20P50875 604 aa3.3□□□□□ -1.88
SHQ1YIL104C BOL2P53082 120 aa3.3□□□□□ -1.88
SHQ1YIL104C OSH6Q02201 448 aa3.3□□□□□ -1.88
SHQ1YIL104C SSL1Q04673 461 aaPredicted RBP3.3□□□□□ -1.88
SHQ1YIL104C BLS1Q06071 122 aa3.3□□□□□ -1.88
SHQ1YIL104C EAF1Q06337 982 aa3.3□□□□□ -1.88
SHQ1YIL104C RSC3Q06639 885 aa3.3□□□□□ -1.88
SHQ1YIL104C ADY3Q07732 790 aa3.3□□□□□ -1.88
SHQ1YIL104C CHS5Q12114 671 aaKnown RBP3.3□□□□□ -1.88
SHQ1YIL104C NCA2Q12374 616 aa3.3□□□□□ -1.88
SHQ1YIL104C KCS1Q12494 1050 aa3.3□□□□□ -1.88
SHQ1YIL104C RGS2Q99188 309 aa3.3□□□□□ -1.88
SHQ1YIL104C COX3P00420 269 aa3.29□□□□□ -1.88
SHQ1YIL104C SPT3P06844 337 aa3.29□□□□□ -1.88
SHQ1YIL104C RPL1AP0CX43 217 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C RPL1BP0CX44 217 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C SPT15P13393 240 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C GUK1P15454 187 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C MET8P15807 274 aa3.29□□□□□ -1.88
SHQ1YIL104C PRP16P15938 1071 aaPredicted RBP3.29□□□□□ -1.88
SHQ1YIL104C SCL1P21243 252 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C AMD2P22580 549 aa3.29□□□□□ -1.88
SHQ1YIL104C MRPL25P23369 157 aa3.29□□□□□ -1.88
SHQ1YIL104C RIM1P32445 135 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C ATP11P32453 318 aa3.29□□□□□ -1.88
SHQ1YIL104C TIP20P33891 701 aa3.29□□□□□ -1.88
SHQ1YIL104C PEX5P35056 612 aa3.29□□□□□ -1.88
SHQ1YIL104C NUP120P35729 1037 aa3.29□□□□□ -1.88
SHQ1YIL104C EMC3P36039 253 aa3.29□□□□□ -1.88
SHQ1YIL104C YJL206CP39529 758 aa3.29□□□□□ -1.88
SHQ1YIL104C SSP120P39931 234 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C COA1P40452 197 aa3.29□□□□□ -1.88
SHQ1YIL104C QDR1P40475 563 aa3.29□□□□□ -1.88
SHQ1YIL104C SEC27P41811 889 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C ZIM17P42844 174 aa3.29□□□□□ -1.88
SHQ1YIL104C SGF73P53165 657 aa3.29□□□□□ -1.88
SHQ1YIL104C FHN1P53279 174 aa3.29□□□□□ -1.88
SHQ1YIL104C EFM6P53970 246 aa3.29□□□□□ -1.88
SHQ1YIL104C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
SHQ1YIL104C TAF12Q03761 539 aa3.29□□□□□ -1.88
SHQ1YIL104C ARX1Q03862 593 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C YML096WQ04489 525 aa3.29□□□□□ -1.88
SHQ1YIL104C ARG7Q04728 441 aa3.29□□□□□ -1.88
SHQ1YIL104C FAR8Q05040 523 aa3.29□□□□□ -1.88
SHQ1YIL104C GLO2Q05584 274 aa3.29□□□□□ -1.88
SHQ1YIL104C RIF2Q06208 395 aa3.29□□□□□ -1.88
SHQ1YIL104C YLR177WQ06251 628 aa3.29□□□□□ -1.88
SHQ1YIL104C RAD34Q06665 692 aa3.29□□□□□ -1.88
SHQ1YIL104C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
SHQ1YIL104C PLB3Q08108 686 aa3.29□□□□□ -1.88
SHQ1YIL104C GPB1Q08886 897 aa3.29□□□□□ -1.88
SHQ1YIL104C PUS9Q12069 462 aa3.29□□□□□ -1.88
SHQ1YIL104C RKM5Q12367 367 aa3.29□□□□□ -1.88
SHQ1YIL104C MHT1Q12525 324 aa3.29□□□□□ -1.88
SHQ1YIL104C IRA1P18963 3092 aa3.29□□□□□ -1.88
SHQ1YIL104C LEU4P06208 619 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C RPL40AP0CH08 128 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C RPL40BP0CH09 128 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C MLS1P30952 554 aa3.29□□□□□ -1.88
SHQ1YIL104C CDC3P32457 520 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C SPR1P32603 445 aa3.29□□□□□ -1.88
SHQ1YIL104C SDH3P33421 198 aa3.29□□□□□ -1.88
SHQ1YIL104C SLD2P34252 453 aa3.29□□□□□ -1.88
SHQ1YIL104C ASK1P35734 292 aa3.29□□□□□ -1.88
SHQ1YIL104C RRP14P36080 434 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C MRPL37P36532 105 aa3.29□□□□□ -1.88
SHQ1YIL104C DED81P38707 554 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C RRP3P38712 501 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C EFM1P38732 585 aa3.29□□□□□ -1.88
SHQ1YIL104C YHR045WP38775 560 aa3.29□□□□□ -1.88
SHQ1YIL104C YHB1P39676 399 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C LSM5P40089 93 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C LTP1P40347 161 aa3.29□□□□□ -1.88
SHQ1YIL104C AZF1P41696 914 aa3.29□□□□□ -1.88
SHQ1YIL104C SSU1P41930 458 aa3.29□□□□□ -1.88
SHQ1YIL104C TDA10P42938 290 aa3.29□□□□□ -1.88
SHQ1YIL104C PTR3P43606 678 aa3.29□□□□□ -1.88
SHQ1YIL104C HXT16P47185 567 aa3.29□□□□□ -1.88
SHQ1YIL104C AIF1P52923 378 aa3.29□□□□□ -1.88
SHQ1YIL104C YGL108CP53139 140 aa3.29□□□□□ -1.88
SHQ1YIL104C HXT15P54854 567 aa3.29□□□□□ -1.88
SHQ1YIL104C NBA1Q08229 501 aaKnown RBP3.29□□□□□ -1.88
SHQ1YIL104C MDY2Q12285 212 aa3.29□□□□□ -1.88
SHQ1YIL104C YOR012WQ12351 137 aa3.29□□□□□ -1.88
SHQ1YIL104C CPA1P07258 411 aaKnown RBP3.28□□□□□ -1.88
SHQ1YIL104C ART10P18634 518 aaKnown RBP3.28□□□□□ -1.88
SHQ1YIL104C BAS1P22035 811 aa3.28□□□□□ -1.88
SHQ1YIL104C MF(ALPHA)2P32435 120 aa3.28□□□□□ -1.88
SHQ1YIL104C PHA2P32452 334 aa3.28□□□□□ -1.88
SHQ1YIL104C MGM101P32787 269 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms