RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN10, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN10	YHR200W	IDP3	P53982	420 aa	Known RBP	13.52	□□□□□ -0.25
RPN10	YHR200W	RPM2	Q02773	1202 aa		13.52	□□□□□ -0.25
RPN10	YHR200W	YMR111C	Q04461	462 aa	Predicted RBP	13.52	□□□□□ -0.25
RPN10	YHR200W	YPR011C	Q12251	326 aa		13.52	□□□□□ -0.25
RPN10	YHR200W	INM1	P38710	295 aa		13.51	□□□□□ -0.25
RPN10	YHR200W	ECM1	P39715	212 aa		13.51	□□□□□ -0.25
RPN10	YHR200W	DIM1	P41819	318 aa	Known RBP	13.51	□□□□□ -0.25
RPN10	YHR200W	STB2	P46679	850 aa		13.51	□□□□□ -0.25
RPN10	YHR200W	FAA4	P47912	694 aa	Known RBP	13.51	□□□□□ -0.25
RPN10	YHR200W	FAP1	P53971	965 aa		13.51	□□□□□ -0.25
RPN10	YHR200W	HSP31	Q04432	237 aa		13.51	□□□□□ -0.25
RPN10	YHR200W	YDR124W	Q04608	324 aa		13.51	□□□□□ -0.25
RPN10	YHR200W	ADF1	Q2V2Q1	113 aa		13.51	□□□□□ -0.25
RPN10	YHR200W	DEF1	P35732	738 aa	Known RBP	13.5	□□□□□ -0.25
RPN10	YHR200W	HES1	P35843	434 aa		13.5	□□□□□ -0.25
RPN10	YHR200W	YPT35	P38815	214 aa	Known RBP	13.5	□□□□□ -0.25
RPN10	YHR200W	BAT1	P38891	393 aa	Known RBP	13.5	□□□□□ -0.25
RPN10	YHR200W	IMA5	P40884	581 aa		13.5	□□□□□ -0.25
RPN10	YHR200W	SNO2	P53823	222 aa		13.5	□□□□□ -0.25
RPN10	YHR200W	CAF120	P53836	1060 aa		13.5	□□□□□ -0.25
RPN10	YHR200W	ATG26	Q06321	1198 aa		13.5	□□□□□ -0.25
RPN10	YHR200W	NAG1	Q8TGN9	163 aa		13.5	□□□□□ -0.25
RPN10	YHR200W	ATP6	P00854	259 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	FUM1	P08417	488 aa	Known RBP	13.49	□□□□□ -0.25
RPN10	YHR200W	TUB1	P09733	447 aa	Known RBP	13.49	□□□□□ -0.25
RPN10	YHR200W	RDS2	P19541	446 aa	Known RBP	13.49	□□□□□ -0.25
RPN10	YHR200W	CCA1	P21269	546 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	CIN8	P27895	1000 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	AAR2	P32357	355 aa	Predicted RBP	13.49	□□□□□ -0.25
RPN10	YHR200W	VPS21	P36017	210 aa	Known RBP	13.49	□□□□□ -0.25
RPN10	YHR200W	MUM2	P38236	366 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	AYR1	P40471	297 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	MAM33	P40513	266 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	YGL176C	P46945	554 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	DIA3	P52290	468 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	ERP6	P53198	216 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	YNL140C	P53910	189 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	NIS1	P53939	407 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	HMO1	Q03973	246 aa	Known RBP	13.49	□□□□□ -0.25
RPN10	YHR200W	MUM3	Q08750	479 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	RGT2	Q12300	763 aa		13.49	□□□□□ -0.25
RPN10	YHR200W	SAN1	P22470	610 aa		13.48	□□□□□ -0.25
RPN10	YHR200W	TFC1	P32367	649 aa		13.48	□□□□□ -0.25
RPN10	YHR200W	SOL2	P37262	315 aa		13.48	□□□□□ -0.25
RPN10	YHR200W	YBR071W	P38243	211 aa		13.48	□□□□□ -0.25
RPN10	YHR200W	IST2	P38250	946 aa		13.48	□□□□□ -0.25
RPN10	YHR200W	SEC26	P41810	973 aa	Known RBP	13.48	□□□□□ -0.25
RPN10	YHR200W	COS12	P53053	380 aa		13.48	□□□□□ -0.25
RPN10	YHR200W	YNL035C	P53962	389 aa	Known RBP	13.48	□□□□□ -0.25
RPN10	YHR200W	RPN8	Q08723	338 aa	Known RBP	13.48	□□□□□ -0.25
RPN10	YHR200W	TFB4	Q12004	338 aa		13.48	□□□□□ -0.25
RPN10	YHR200W	YPL245W	Q12179	454 aa	Known RBP	13.48	□□□□□ -0.25
RPN10	YHR200W	YLL054C	Q12244	843 aa		13.48	□□□□□ -0.25
RPN10	YHR200W	TY4A-H	Q6Q5P6	413 aa		13.48	□□□□□ -0.25
RPN10	YHR200W	MRP13	P12686	339 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	MSS116	P15424	664 aa	Known RBP	13.47	□□□□□ -0.25
RPN10	YHR200W	PHO81	P17442	1178 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	HCM1	P25364	564 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	HXT4	P32467	576 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	TCD2	P36101	447 aa	Known RBP	13.47	□□□□□ -0.25
RPN10	YHR200W	HXT6	P39003	570 aa	Known RBP	13.47	□□□□□ -0.25
RPN10	YHR200W	HXT7	P39004	570 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	HPM1	P40481	377 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	SEC27	P41811	889 aa	Known RBP	13.47	□□□□□ -0.25
RPN10	YHR200W	MEP2	P41948	499 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	GCV1	P48015	400 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	UPF3	P48412	387 aa	Known RBP	13.47	□□□□□ -0.25
RPN10	YHR200W	COS6	P53344	381 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	SVL3	Q03088	825 aa	Known RBP	13.47	□□□□□ -0.25
RPN10	YHR200W	EFR3	Q03653	782 aa	Known RBP	13.47	□□□□□ -0.25
RPN10	YHR200W	RUP1	Q12242	671 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	SUL2	Q12325	893 aa		13.47	□□□□□ -0.25
RPN10	YHR200W	COX3	P00420	269 aa		13.46	□□□□□ -0.25
RPN10	YHR200W	RPL24A	P04449	155 aa	Known RBP	13.46	□□□□□ -0.25
RPN10	YHR200W	LAT1	P12695	482 aa	Known RBP	13.46	□□□□□ -0.25
RPN10	YHR200W	TOP3	P13099	656 aa		13.46	□□□□□ -0.25
RPN10	YHR200W	SCL1	P21243	252 aa	Known RBP	13.46	□□□□□ -0.25
RPN10	YHR200W	SGV1	P23293	657 aa	Known RBP	13.46	□□□□□ -0.25
RPN10	YHR200W	ERG6	P25087	383 aa	Known RBP	13.46	□□□□□ -0.25
RPN10	YHR200W	RML2	P32611	393 aa		13.46	□□□□□ -0.25
RPN10	YHR200W	CAB2	P40506	365 aa		13.46	□□□□□ -0.25
RPN10	YHR200W	MDJ2	P42834	146 aa		13.46	□□□□□ -0.25
RPN10	YHR200W	SPC2	Q04969	178 aa		13.46	□□□□□ -0.25
RPN10	YHR200W	SLF1	Q12034	447 aa	Known RBP	13.46	□□□□□ -0.25
RPN10	YHR200W	THP2	O13539	261 aa	Known RBP	13.45	□□□□□ -0.26
RPN10	YHR200W	ATP2	P00830	511 aa	Known RBP	13.45	□□□□□ -0.26
RPN10	YHR200W	RAS2	P01120	322 aa	Known RBP	13.45	□□□□□ -0.26
RPN10	YHR200W	ATP4	P05626	244 aa		13.45	□□□□□ -0.26
RPN10	YHR200W	STE14	P32584	239 aa		13.45	□□□□□ -0.26
RPN10	YHR200W	SLX5	P32828	619 aa	Known RBP	13.45	□□□□□ -0.26
RPN10	YHR200W	MED8	P38304	223 aa		13.45	□□□□□ -0.26
RPN10	YHR200W	DED81	P38707	554 aa	Known RBP	13.45	□□□□□ -0.26
RPN10	YHR200W	AXL2	P38928	823 aa		13.45	□□□□□ -0.26
RPN10	YHR200W	GIP4	P39732	760 aa		13.45	□□□□□ -0.26
RPN10	YHR200W	YNR021W	P53723	404 aa	Known RBP	13.45	□□□□□ -0.26
RPN10	YHR200W	GOR1	P53839	350 aa		13.45	□□□□□ -0.26
RPN10	YHR200W	GIP3	Q03016	1276 aa		13.45	□□□□□ -0.26
RPN10	YHR200W	GMC2	Q06201	188 aa		13.45	□□□□□ -0.26
RPN10	YHR200W	SRO7	Q12038	1033 aa		13.45	□□□□□ -0.26
RPN10	YHR200W	RPN5	Q12250	445 aa	Known RBP	13.45	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms