RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C RML2P32611 393 aa3.04□□□□□ -1.92
MSH4YFL003C MIA40P36046 403 aa3.04□□□□□ -1.92
MSH4YFL003C APE3P37302 537 aaKnown RBP3.04□□□□□ -1.92
MSH4YFL003C AGP2P38090 596 aa3.04□□□□□ -1.92
MSH4YFL003C RIX1P38883 763 aaPredicted RBP3.04□□□□□ -1.92
MSH4YFL003C ULP2P40537 1034 aaPredicted RBP3.04□□□□□ -1.92
MSH4YFL003C ECM27P47144 725 aa3.04□□□□□ -1.92
MSH4YFL003C DIA3P52290 468 aa3.04□□□□□ -1.92
MSH4YFL003C ATG26Q06321 1198 aa3.04□□□□□ -1.92
MSH4YFL003C NFI1Q12216 726 aa3.04□□□□□ -1.92
MSH4YFL003C YDL007C-AQ2V2Q0 85 aa3.04□□□□□ -1.92
MSH4YFL003C YRF1-4O13559 1382 aa3.03□□□□□ -1.92
MSH4YFL003C PUT2P07275 575 aa3.03□□□□□ -1.92
MSH4YFL003C MDH1P17505 334 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
MSH4YFL003C BUD5P25300 642 aaPredicted RBP3.03□□□□□ -1.92
MSH4YFL003C MGM1P32266 881 aa3.03□□□□□ -1.92
MSH4YFL003C RPN2P32565 945 aaKnown RBP3.03□□□□□ -1.92
MSH4YFL003C RFC1P38630 861 aaKnown RBP3.03□□□□□ -1.92
MSH4YFL003C ZIM17P42844 174 aa3.03□□□□□ -1.92
MSH4YFL003C YMR178WQ03219 274 aaKnown RBP3.03□□□□□ -1.92
MSH4YFL003C YDR341CQ05506 607 aaKnown RBP3.03□□□□□ -1.92
MSH4YFL003C RRP9Q06506 573 aaKnown RBP3.03□□□□□ -1.92
MSH4YFL003C FMP45Q07651 309 aa3.03□□□□□ -1.92
MSH4YFL003C RLP24Q07915 199 aaKnown RBP3.03□□□□□ -1.92
MSH4YFL003C LEU9Q12166 604 aaKnown RBP3.03□□□□□ -1.92
MSH4YFL003C TY1B-NL2Q99337 1749 aaKnown RBP3.03□□□□□ -1.92
MSH4YFL003C VTH1P40438 1549 aa3.03□□□□□ -1.92
MSH4YFL003C VTH2P40890 1549 aa3.03□□□□□ -1.92
MSH4YFL003C RAP1P11938 827 aa3.03□□□□□ -1.93
MSH4YFL003C CDC43P18898 376 aa3.03□□□□□ -1.93
MSH4YFL003C CPR2P23285 205 aa3.03□□□□□ -1.93
MSH4YFL003C CNA1P23287 553 aa3.03□□□□□ -1.93
MSH4YFL003C SEF1P34228 1148 aa3.03□□□□□ -1.93
MSH4YFL003C YJL055WP47044 245 aa3.03□□□□□ -1.93
MSH4YFL003C ERG26P53199 349 aaKnown RBP3.03□□□□□ -1.93
MSH4YFL003C FMP30Q02883 468 aa3.03□□□□□ -1.93
MSH4YFL003C RSC9Q03124 581 aa3.03□□□□□ -1.93
MSH4YFL003C HOT1Q03213 719 aa3.03□□□□□ -1.93
MSH4YFL003C PFA5Q03289 374 aa3.03□□□□□ -1.93
MSH4YFL003C GYL1Q04322 720 aa3.03□□□□□ -1.93
MSH4YFL003C SEC39Q12745 709 aa3.03□□□□□ -1.93
MSH4YFL003C SMC4Q12267 1418 aa3.02□□□□□ -1.93
MSH4YFL003C HAP1P0CE41 1502 aa3.02□□□□□ -1.93
MSH4YFL003C POT1P27796 417 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
MSH4YFL003C MSR1P38714 643 aa3.02□□□□□ -1.93
MSH4YFL003C SER3P40054 469 aa3.02□□□□□ -1.93
MSH4YFL003C ALG5P40350 334 aa3.02□□□□□ -1.93
MSH4YFL003C NMD5P46970 1048 aa3.02□□□□□ -1.93
MSH4YFL003C FMS1P50264 508 aa3.02□□□□□ -1.93
MSH4YFL003C RSM23Q01163 450 aa3.02□□□□□ -1.93
MSH4YFL003C YPL107WQ02873 248 aa3.02□□□□□ -1.93
MSH4YFL003C YDR239CQ03780 787 aa3.02□□□□□ -1.93
MSH4YFL003C CAC2Q04199 468 aa3.02□□□□□ -1.93
MSH4YFL003C YOR365CQ08844 703 aa3.02□□□□□ -1.93
MSH4YFL003C KEL3Q08979 651 aaPredicted RBP3.02□□□□□ -1.93
MSH4YFL003C FRE6Q12473 712 aa3.02□□□□□ -1.93
MSH4YFL003C SPP41P38904 1435 aa3.02□□□□□ -1.93
MSH4YFL003C TY1B-AO13527 1196 aaKnown RBP3.02□□□□□ -1.93
MSH4YFL003C RAD52P06778 471 aaKnown RBP3.02□□□□□ -1.93
MSH4YFL003C YER190C-BP0CX94 160 aa3.02□□□□□ -1.93
MSH4YFL003C YEL077W-AP0CX95 160 aa3.02□□□□□ -1.93
MSH4YFL003C YGR296C-BP0CX96 160 aa3.02□□□□□ -1.93
MSH4YFL003C YPL283W-BP0CX97 160 aa3.02□□□□□ -1.93
MSH4YFL003C YPR204C-AP0CX98 160 aa3.02□□□□□ -1.93
MSH4YFL003C TRX1P22217 103 aaKnown RBP3.02□□□□□ -1.93
MSH4YFL003C IDH2P28241 369 aaKnown RBP3.02□□□□□ -1.93
MSH4YFL003C UIP5P36137 443 aa3.02□□□□□ -1.93
MSH4YFL003C OTU2P38747 307 aaKnown RBP3.02□□□□□ -1.93
MSH4YFL003C FYV8P46949 817 aaKnown RBP3.02□□□□□ -1.93
MSH4YFL003C BPL1P48445 690 aaPredicted RBP3.02□□□□□ -1.93
MSH4YFL003C ORC5P50874 479 aa3.02□□□□□ -1.93
MSH4YFL003C VID30P53076 958 aa3.02□□□□□ -1.93
MSH4YFL003C BUD32P53323 261 aa3.02□□□□□ -1.93
MSH4YFL003C RSF1Q05043 376 aa3.02□□□□□ -1.93
MSH4YFL003C PDR8Q06149 701 aa3.02□□□□□ -1.93
MSH4YFL003C MCH4Q08268 501 aa3.02□□□□□ -1.93
MSH4YFL003C SPE3Q12074 293 aaKnown RBP3.02□□□□□ -1.93
MSH4YFL003C GPM3Q12326 303 aa3.02□□□□□ -1.93
MSH4YFL003C MLP2P40457 1679 aa3.01□□□□□ -1.93
MSH4YFL003C MRP2P10663 115 aaPredicted RBP3.01□□□□□ -1.93
MSH4YFL003C REC107P21651 314 aa3.01□□□□□ -1.93
MSH4YFL003C YIM1P28625 365 aa3.01□□□□□ -1.93
MSH4YFL003C PAP1P29468 568 aaKnown RBP3.01□□□□□ -1.93
MSH4YFL003C HXT14P42833 540 aa3.01□□□□□ -1.93
MSH4YFL003C FAR3P46671 204 aa3.01□□□□□ -1.93
MSH4YFL003C OCA1P50946 238 aaPredicted RBP3.01□□□□□ -1.93
MSH4YFL003C NUP100Q02629 959 aa3.01□□□□□ -1.93
MSH4YFL003C VTI1Q04338 217 aa3.01□□□□□ -1.93
MSH4YFL003C TPO3Q06451 622 aa3.01□□□□□ -1.93
MSH4YFL003C REX3Q12090 404 aa3.01□□□□□ -1.93
MSH4YFL003C MYO4P32492 1471 aa3.01□□□□□ -1.93
MSH4YFL003C PDR10P51533 1564 aa3.01□□□□□ -1.93
MSH4YFL003C SUC2P00724 532 aa3.01□□□□□ -1.93
MSH4YFL003C STF1P01098 86 aa3.01□□□□□ -1.93
MSH4YFL003C GLK1P17709 500 aaKnown RBP3.01□□□□□ -1.93
MSH4YFL003C PRP2P20095 876 aaPredicted RBP3.01□□□□□ -1.93
MSH4YFL003C LAS1P36146 502 aaPredicted RBP3.01□□□□□ -1.93
MSH4YFL003C EFM4P40516 257 aa3.01□□□□□ -1.93
MSH4YFL003C IRC7P43623 340 aa3.01□□□□□ -1.93
MSH4YFL003C EOS1P53938 366 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms