RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C NDD1Q08887 554 aa1.03□□□□□ -2.24
UBP3YER151C FAP7Q12055 197 aaPredicted RBP1.03□□□□□ -2.24
UBP3YER151C GET3Q12154 354 aaKnown RBP1.03□□□□□ -2.24
UBP3YER151C LCB4Q12246 624 aa1.03□□□□□ -2.24
UBP3YER151C DBP10Q12389 995 aaKnown RBP1.03□□□□□ -2.24
UBP3YER151C SKM1Q12469 655 aa1.03□□□□□ -2.24
UBP3YER151C SNF1P06782 633 aaKnown RBP1.03□□□□□ -2.24
UBP3YER151C NUC1P08466 329 aa1.03□□□□□ -2.24
UBP3YER151C ILS1P09436 1072 aaKnown RBP1.03□□□□□ -2.24
UBP3YER151C YEL076C-AP0CX16 216 aa1.03□□□□□ -2.24
UBP3YER151C YLR464WP0CX17 216 aa1.03□□□□□ -2.24
UBP3YER151C HOP1P20050 605 aa1.03□□□□□ -2.24
UBP3YER151C MEI4P29467 408 aa1.03□□□□□ -2.24
UBP3YER151C CRM1P30822 1084 aaKnown RBP1.03□□□□□ -2.24
UBP3YER151C SGE1P33335 543 aa1.03□□□□□ -2.24
UBP3YER151C GCS1P35197 352 aa1.03□□□□□ -2.24
UBP3YER151C SWD2P36104 329 aaPredicted RBP1.03□□□□□ -2.24
UBP3YER151C ADE17P38009 592 aaKnown RBP1.03□□□□□ -2.24
UBP3YER151C SIP3P38717 1229 aa1.03□□□□□ -2.24
UBP3YER151C YEL076CP39971 216 aa1.03□□□□□ -2.24
UBP3YER151C UBP7P40453 1071 aa1.03□□□□□ -2.24
UBP3YER151C CHS6P40955 746 aa1.03□□□□□ -2.24
UBP3YER151C YJL107CP42947 387 aa1.03□□□□□ -2.24
UBP3YER151C GSM1P42950 618 aa1.03□□□□□ -2.24
UBP3YER151C PMT3P47190 753 aa1.03□□□□□ -2.24
UBP3YER151C YNR071CP53757 342 aa1.03□□□□□ -2.24
UBP3YER151C MRPL19P53875 158 aa1.03□□□□□ -2.24
UBP3YER151C IGO1P53897 168 aa1.03□□□□□ -2.24
UBP3YER151C YLR456WQ06199 204 aa1.03□□□□□ -2.24
UBP3YER151C YOL019WQ08157 551 aa1.03□□□□□ -2.24
UBP3YER151C RPN8Q08723 338 aaKnown RBP1.03□□□□□ -2.24
UBP3YER151C CWC2Q12046 339 aaPredicted RBP1.03□□□□□ -2.24
UBP3YER151C SIA1Q12212 622 aa1.03□□□□□ -2.24
UBP3YER151C YLR111WQ12528 110 aa1.03□□□□□ -2.24
UBP3YER151C YIL046W-AQ3E7Z4 54 aa1.03□□□□□ -2.24
UBP3YER151C HSH49Q99181 213 aaPredicted RBP1.03□□□□□ -2.24
UBP3YER151C SEM1O94742 89 aa1.02□□□□□ -2.25
UBP3YER151C COX1P00401 534 aa1.02□□□□□ -2.25
UBP3YER151C URA3P03962 267 aa1.02□□□□□ -2.25
UBP3YER151C AMD2P22580 549 aa1.02□□□□□ -2.25
UBP3YER151C HIR2P32480 875 aa1.02□□□□□ -2.25
UBP3YER151C BYE1P36106 594 aa1.02□□□□□ -2.25
UBP3YER151C APL3P38065 1025 aa1.02□□□□□ -2.25
UBP3YER151C KAP104P38217 918 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C PHO88P38264 188 aaPredicted RBP1.02□□□□□ -2.25
UBP3YER151C EFM2P38347 419 aa1.02□□□□□ -2.25
UBP3YER151C MNT3P40549 630 aa1.02□□□□□ -2.25
UBP3YER151C YFR035CP43608 114 aa1.02□□□□□ -2.25
UBP3YER151C COS12P53053 380 aa1.02□□□□□ -2.25
UBP3YER151C ZRG17P53735 605 aa1.02□□□□□ -2.25
UBP3YER151C FOL1P53848 824 aa1.02□□□□□ -2.25
UBP3YER151C DOS2P54858 310 aa1.02□□□□□ -2.25
UBP3YER151C IRC4Q03036 179 aa1.02□□□□□ -2.25
UBP3YER151C YTH1Q06102 208 aaPredicted RBP1.02□□□□□ -2.25
UBP3YER151C MRD1Q06106 887 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C PSK2Q08217 1101 aa1.02□□□□□ -2.25
UBP3YER151C PRS5Q12265 496 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C YOR012WQ12351 137 aa1.02□□□□□ -2.25
UBP3YER151C YGR161W-CQ3E744 92 aa1.02□□□□□ -2.25
UBP3YER151C YOR111WQ99210 232 aa1.02□□□□□ -2.25
UBP3YER151C HEM2P05373 342 aa1.02□□□□□ -2.25
UBP3YER151C EST1P17214 699 aaPredicted RBP1.02□□□□□ -2.25
UBP3YER151C RNR3P21672 869 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C YCR102CP25608 368 aa1.02□□□□□ -2.25
UBP3YER151C RPS0AP32905 252 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C DID4P36108 232 aa1.02□□□□□ -2.25
UBP3YER151C MMS4P38257 691 aa1.02□□□□□ -2.25
UBP3YER151C IMD2P38697 523 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C TIM17P39515 158 aa1.02□□□□□ -2.25
UBP3YER151C SCC4P40090 624 aa1.02□□□□□ -2.25
UBP3YER151C SAP185P40856 1058 aa1.02□□□□□ -2.25
UBP3YER151C IMA5P40884 581 aa1.02□□□□□ -2.25
UBP3YER151C SAE2P46946 345 aa1.02□□□□□ -2.25
UBP3YER151C TCB2P48231 1178 aa1.02□□□□□ -2.25
UBP3YER151C IMD3P50095 523 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C PYK2P52489 506 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C CUL3P53202 744 aa1.02□□□□□ -2.25
UBP3YER151C PEF1P53238 335 aa1.02□□□□□ -2.25
UBP3YER151C MOT3P54785 490 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C SLG1P54867 378 aa1.02□□□□□ -2.25
UBP3YER151C ACS1Q01574 713 aa1.02□□□□□ -2.25
UBP3YER151C NGL2Q03264 515 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C TRM82Q03774 444 aa1.02□□□□□ -2.25
UBP3YER151C TMA64Q04600 565 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C HRI1Q05905 244 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C PLB3Q08108 686 aa1.02□□□□□ -2.25
UBP3YER151C SRL1Q08673 210 aa1.02□□□□□ -2.25
UBP3YER151C YPR027CQ12079 277 aa1.02□□□□□ -2.25
UBP3YER151C NCB2Q92317 146 aa1.02□□□□□ -2.25
UBP3YER151C FLO9P39712 1322 aa1.02□□□□□ -2.25
UBP3YER151C CPA2P03965 1118 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C RPL7AP05737 244 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C DAL81P21657 970 aa1.02□□□□□ -2.25
UBP3YER151C GID7P25569 745 aa1.02□□□□□ -2.25
UBP3YER151C CIN8P27895 1000 aa1.02□□□□□ -2.25
UBP3YER151C PRE2P30656 287 aaKnown RBP1.02□□□□□ -2.25
UBP3YER151C RAD16P31244 790 aa1.02□□□□□ -2.25
UBP3YER151C PUP2P32379 260 aa1.02□□□□□ -2.25
UBP3YER151C UTR4P32626 227 aa1.02□□□□□ -2.25
UBP3YER151C PMT1P33775 817 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms