RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	STE23	Q06010	1027 aa		4.02	□□□□□ -1.77
SLX8	YER116C	GGA1	Q06336	557 aa		4.02	□□□□□ -1.77
SLX8	YER116C	ARR2	Q06597	130 aa		4.02	□□□□□ -1.77
SLX8	YER116C	ATG23	Q06671	453 aa		4.02	□□□□□ -1.77
SLX8	YER116C	ECM30	Q06673	1274 aa		4.02	□□□□□ -1.77
SLX8	YER116C	CDA1	Q06702	301 aa		4.02	□□□□□ -1.77
SLX8	YER116C	GPN2	Q08726	347 aa	Predicted RBP	4.02	□□□□□ -1.77
SLX8	YER116C	SFG1	Q12507	346 aa		4.02	□□□□□ -1.77
SLX8	YER116C	MF(ALPHA)1	P01149	165 aa		4.01	□□□□□ -1.77
SLX8	YER116C	YML003W	P0CF16	290 aa		4.01	□□□□□ -1.77
SLX8	YER116C	RPS4A	P0CX35	261 aa	Known RBP	4.01	□□□□□ -1.77
SLX8	YER116C	RPS4B	P0CX36	261 aa	Known RBP	4.01	□□□□□ -1.77
SLX8	YER116C	GAL3	P13045	520 aa		4.01	□□□□□ -1.77
SLX8	YER116C	RNR1	P21524	888 aa	Known RBP	4.01	□□□□□ -1.77
SLX8	YER116C	SEC62	P21825	274 aa		4.01	□□□□□ -1.77
SLX8	YER116C	STE11	P23561	717 aa		4.01	□□□□□ -1.77
SLX8	YER116C	APL1	P27351	700 aa		4.01	□□□□□ -1.77
SLX8	YER116C	PRO3	P32263	286 aa	Known RBP	4.01	□□□□□ -1.77
SLX8	YER116C	MVD1	P32377	396 aa	Known RBP	4.01	□□□□□ -1.77
SLX8	YER116C	ARO4	P32449	370 aa	Known RBP	4.01	□□□□□ -1.77
SLX8	YER116C	SWC5	P38326	303 aa		4.01	□□□□□ -1.77
SLX8	YER116C	TAE1	P38340	232 aa		4.01	□□□□□ -1.77
SLX8	YER116C	YHL012W	P38709	493 aa		4.01	□□□□□ -1.77
SLX8	YER116C	YHR112C	P38716	378 aa		4.01	□□□□□ -1.77
SLX8	YER116C	YER085C	P40058	173 aa		4.01	□□□□□ -1.77
SLX8	YER116C	BUR6	P40096	142 aa		4.01	□□□□□ -1.77
SLX8	YER116C	SDP1	P40479	209 aa		4.01	□□□□□ -1.77
SLX8	YER116C	CIN1	P40987	1014 aa		4.01	□□□□□ -1.77
SLX8	YER116C	BNA6	P43619	295 aa		4.01	□□□□□ -1.77
SLX8	YER116C	YGR012W	P53206	393 aa		4.01	□□□□□ -1.77
SLX8	YER116C	SLK19	Q08581	821 aa	Known RBP	4.01	□□□□□ -1.77
SLX8	YER116C	NTO1	Q12311	748 aa		4.01	□□□□□ -1.77
SLX8	YER116C	POM34	Q12445	299 aa		4.01	□□□□□ -1.77
SLX8	YER116C	YBL111C	Q3E7Y5	667 aa		4.01	□□□□□ -1.77
SLX8	YER116C	MEK1	P24719	497 aa	Predicted RBP	4	□□□□□ -1.77
SLX8	YER116C	ACP1	P32463	125 aa		4	□□□□□ -1.77
SLX8	YER116C	HXT1	P32465	570 aa		4	□□□□□ -1.77
SLX8	YER116C	PDB1	P32473	366 aa	Known RBP	4	□□□□□ -1.77
SLX8	YER116C	DSS4	P32601	143 aa		4	□□□□□ -1.77
SLX8	YER116C	SPR1	P32603	445 aa		4	□□□□□ -1.77
SLX8	YER116C	UGP1	P32861	499 aa	Known RBP	4	□□□□□ -1.77
SLX8	YER116C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
SLX8	YER116C	STB2	P46679	850 aa		4	□□□□□ -1.77
SLX8	YER116C	URB2	P47108	1174 aa		4	□□□□□ -1.77
SLX8	YER116C	COS5	P47187	383 aa		4	□□□□□ -1.77
SLX8	YER116C	ESBP6	P53918	673 aa		4	□□□□□ -1.77
SLX8	YER116C	MUK1	Q02866	612 aa		4	□□□□□ -1.77
SLX8	YER116C	INA17	Q02888	182 aa		4	□□□□□ -1.77
SLX8	YER116C	RLI1	Q03195	608 aa	Known RBP	4	□□□□□ -1.77
SLX8	YER116C	ERV41	Q04651	352 aa		4	□□□□□ -1.77
SLX8	YER116C	DCS1	Q06151	350 aa		4	□□□□□ -1.77
SLX8	YER116C	CRN1	Q06440	651 aa		4	□□□□□ -1.77
SLX8	YER116C	MCM21	Q06675	368 aa		4	□□□□□ -1.77
SLX8	YER116C	COS7	Q07788	383 aa		4	□□□□□ -1.77
SLX8	YER116C	LEA1	Q08963	238 aa	Predicted RBP	4	□□□□□ -1.77
SLX8	YER116C	YOR012W	Q12351	137 aa		4	□□□□□ -1.77
SLX8	YER116C	CAR1	P00812	333 aa	Known RBP	3.99	□□□□□ -1.77
SLX8	YER116C	LRE1	P25579	583 aa	Known RBP	3.99	□□□□□ -1.77
SLX8	YER116C	YCR016W	P25617	290 aa	Known RBP	3.99	□□□□□ -1.77
SLX8	YER116C	RFA2	P26754	273 aa	Known RBP	3.99	□□□□□ -1.77
SLX8	YER116C	YIM1	P28625	365 aa		3.99	□□□□□ -1.77
SLX8	YER116C	DCG1	P32460	244 aa		3.99	□□□□□ -1.77
SLX8	YER116C	RFC5	P38251	354 aa		3.99	□□□□□ -1.77
SLX8	YER116C	YJL193W	P39542	402 aa		3.99	□□□□□ -1.77
SLX8	YER116C	VHS2	P40463	436 aa		3.99	□□□□□ -1.77
SLX8	YER116C	OTU1	P43558	301 aa		3.99	□□□□□ -1.77
SLX8	YER116C	AIM22	P47051	409 aa		3.99	□□□□□ -1.77
SLX8	YER116C	ECL1	P48235	211 aa		3.99	□□□□□ -1.77
SLX8	YER116C	BRO1	P48582	844 aa		3.99	□□□□□ -1.77
SLX8	YER116C	HSH155	P49955	971 aa	Known RBP	3.99	□□□□□ -1.77
SLX8	YER116C	CAF130	P53280	1122 aa	Predicted RBP	3.99	□□□□□ -1.77
SLX8	YER116C	DBP6	P53734	629 aa	Known RBP	3.99	□□□□□ -1.77
SLX8	YER116C	USA1	Q03714	838 aa		3.99	□□□□□ -1.77
SLX8	YER116C	EKI1	Q03764	534 aa		3.99	□□□□□ -1.77
SLX8	YER116C	FIN1	Q03898	291 aa		3.99	□□□□□ -1.77
SLX8	YER116C	HMO1	Q03973	246 aa	Known RBP	3.99	□□□□□ -1.77
SLX8	YER116C	CRT10	Q08226	957 aa		3.99	□□□□□ -1.77
SLX8	YER116C	NRT1	Q08485	598 aa		3.99	□□□□□ -1.77
SLX8	YER116C	RKM1	Q08961	583 aa	Predicted RBP	3.99	□□□□□ -1.77
SLX8	YER116C	FMP16	Q12497	93 aa		3.99	□□□□□ -1.77
SLX8	YER116C	ARG81	P05085	880 aa		3.98	□□□□□ -1.77
SLX8	YER116C	LEU4	P06208	619 aa	Known RBP	3.98	□□□□□ -1.77
SLX8	YER116C	RNR2	P09938	399 aa	Known RBP	3.98	□□□□□ -1.77
SLX8	YER116C	SAM35	P14693	329 aa		3.98	□□□□□ -1.77
SLX8	YER116C	PRP16	P15938	1071 aa	Predicted RBP	3.98	□□□□□ -1.77
SLX8	YER116C	KGD1	P20967	1014 aa	Known RBP	3.98	□□□□□ -1.77
SLX8	YER116C	APA2	P22108	325 aa		3.98	□□□□□ -1.77
SLX8	YER116C	RIM1	P32445	135 aa	Known RBP	3.98	□□□□□ -1.77
SLX8	YER116C	SIP1	P32578	815 aa		3.98	□□□□□ -1.77
SLX8	YER116C	OCT1	P35999	772 aa		3.98	□□□□□ -1.77
SLX8	YER116C	ADE17	P38009	592 aa	Known RBP	3.98	□□□□□ -1.77
SLX8	YER116C	MAL32	P38158	584 aa		3.98	□□□□□ -1.77
SLX8	YER116C	ERG7	P38604	731 aa		3.98	□□□□□ -1.77
SLX8	YER116C	YNG2	P38806	282 aa	Known RBP	3.98	□□□□□ -1.77
SLX8	YER116C	RCY1	P39531	840 aa		3.98	□□□□□ -1.77
SLX8	YER116C	TMN3	P40071	706 aa		3.98	□□□□□ -1.77
SLX8	YER116C	BIO3	P50277	480 aa		3.98	□□□□□ -1.77
SLX8	YER116C	RIB4	P50861	169 aa	Predicted RBP	3.98	□□□□□ -1.77
SLX8	YER116C	IMO32	P53219	342 aa		3.98	□□□□□ -1.77
SLX8	YER116C	YGR079W	P53249	370 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 60 ms