RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	SEC31	P38968	1273 aa	Known RBP	3.13	□□□□□ -1.91
VMA8	YEL051W	DSN1	P40568	576 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	GCD14	P46959	383 aa	Predicted RBP	3.13	□□□□□ -1.91
VMA8	YEL051W	UPF3	P48412	387 aa	Known RBP	3.13	□□□□□ -1.91
VMA8	YEL051W	RET3	P53600	189 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	YMR317W	Q04893	1140 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	TCO89	Q08921	799 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	MED1	Q12321	566 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	RAD3	P06839	778 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	VMA2	P16140	517 aa	Known RBP	3.12	□□□□□ -1.91
VMA8	YEL051W	REC107	P21651	314 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	POL4	P25615	582 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	PPZ1	P26570	692 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	SSE1	P32589	693 aa	Known RBP	3.12	□□□□□ -1.91
VMA8	YEL051W	PTR2	P32901	601 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	AAP1	P37898	856 aa	Known RBP	3.12	□□□□□ -1.91
VMA8	YEL051W	DED81	P38707	554 aa	Known RBP	3.12	□□□□□ -1.91
VMA8	YEL051W	SGM1	P47166	707 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	AAD10	P47182	288 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	SPO19	Q03029	223 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	PFA5	Q03289	374 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	RBA50	Q04418	439 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	FUS2	Q05670	677 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	UTP21	Q06078	939 aa	Predicted RBP	3.12	□□□□□ -1.91
VMA8	YEL051W	PHO92	Q06390	306 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	REX3	Q12090	404 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	TAH18	Q12181	623 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	TUS1	Q06412	1307 aa		3.12	□□□□□ -1.91
VMA8	YEL051W	CFT1	Q06632	1357 aa	Known RBP	3.12	□□□□□ -1.91
VMA8	YEL051W	SEM1	O94742	89 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	HXK2	P04807	486 aa	Known RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	PHO2	P07269	559 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	SEC53	P07283	254 aa	Known RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	RPL19A	P0CX82	189 aa	Known RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	RPL19B	P0CX83	189 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	CDC23	P16522	626 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	TKL1	P23254	680 aa	Known RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	VPS3	P23643	1011 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	LCB1	P25045	558 aa	Known RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	PEP3	P27801	918 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	DBF4	P32325	704 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	PPQ1	P32945	549 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	YKT6	P36015	200 aa	Known RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	MED8	P38304	223 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	SMC2	P38989	1170 aa	Known RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	ECM10	P39987	644 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	YIR014W	P40570	242 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	SNX4	P47057	423 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	LCL3	P53153	274 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	LSB1	P53281	241 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	YTH1	Q06102	208 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	APL4	Q12028	832 aa		3.11	□□□□□ -1.91
VMA8	YEL051W	RRG1	Q12167	365 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	HSH49	Q99181	213 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA8	YEL051W	MSS116	P15424	664 aa	Known RBP	3.1	□□□□□ -1.91
VMA8	YEL051W	CKA2	P19454	339 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	GRR1	P24814	1151 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	IMP2'	P32351	346 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	PUP2	P32379	260 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	VPS17	P32913	551 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	BUD2	P33314	1104 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	UBP11	P36026	717 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	AUR1	P36107	401 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA8	YEL051W	STV1	P37296	890 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	BZZ1	P38822	633 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	VPS45	P38932	577 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	AFG3	P39925	761 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	YFR020W	P43600	232 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	MDE1	P47095	244 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	RPS7B	P48164	190 aa	Known RBP	3.1	□□□□□ -1.91
VMA8	YEL051W	LYS4	P49367	693 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA8	YEL051W	YML6	P51998	286 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	MIG2	P53035	382 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	DSD1	P53095	428 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	CGR1	P53188	120 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	YNL234W	P53857	426 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	YNL181W	P53878	407 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	ARP5	P53946	755 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	YKU80	Q04437	629 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	ARP10	Q04549	284 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	YLR287C	Q05881	355 aa		3.1	□□□□□ -1.91
VMA8	YEL051W	NOP6	Q07623	225 aa	Known RBP	3.1	□□□□□ -1.91
VMA8	YEL051W	MRP7	P12687	371 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	OM45	P16547	393 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	VMA16	P23968	213 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	MGR1	P25573	417 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	CMK1	P27466	446 aa	Known RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	ASF2	P32448	525 aa	Predicted RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	NIP1	P32497	812 aa	Known RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	RPN2	P32565	945 aa	Known RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	RSM22	P36056	628 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	FMP46	P36141	133 aa	Known RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	YPK3	P38070	525 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	MAK5	P38112	773 aa	Predicted RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	MSR1	P38714	643 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	LRP1	P38801	184 aa	Known RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	MTW1	P39731	289 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	SEC28	P40509	296 aa	Known RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	PKP1	P40530	394 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	AIP1	P46680	615 aa	Known RBP	3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 554.6 ms