RNA–Protein interactions for RNA: YDR456W

NHX1, Transcript of Na+/H+ and K+/H+ exchanger, yeast

Gene NHX1, Length 1,902 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHX1	YDR456W	SPE3	Q12074	293 aa	Known RBP	4.09	□□□□□ -1.76
NHX1	YDR456W	ATG29	Q12092	213 aa		4.09	□□□□□ -1.76
NHX1	YDR456W	YOR342C	Q12182	319 aa		4.09	□□□□□ -1.76
NHX1	YDR456W	HOS1	Q12214	470 aa		4.09	□□□□□ -1.76
NHX1	YDR456W	YOR214C	Q12282	236 aa		4.09	□□□□□ -1.76
NHX1	YDR456W	LDB17	Q12342	491 aa		4.09	□□□□□ -1.76
NHX1	YDR456W	APC2	Q12440	853 aa		4.09	□□□□□ -1.76
NHX1	YDR456W	DCP1	Q12517	231 aa	Predicted RBP	4.09	□□□□□ -1.76
NHX1	YDR456W	RPL11B	Q3E757	174 aa	Predicted RBP	4.09	□□□□□ -1.76
NHX1	YDR456W	LAG2	Q92325	660 aa		4.09	□□□□□ -1.76
NHX1	YDR456W	RGS2	Q99188	309 aa		4.09	□□□□□ -1.76
NHX1	YDR456W	ATP6	P00854	259 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	PDE2	P06776	526 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	FUS1	P11710	512 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	DBF2	P22204	572 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	SLY1	P22213	666 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	AMD2	P22580	549 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	RRP7	P25368	297 aa	Predicted RBP	4.08	□□□□□ -1.76
NHX1	YDR456W	PTC6	P25646	442 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
NHX1	YDR456W	RIM2	P38127	377 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	TSL1	P38427	1098 aa	Known RBP	4.08	□□□□□ -1.76
NHX1	YDR456W	SPL2	P38839	148 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	SHU2	P38957	223 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	MEF2	P39677	819 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	RPN3	P40016	523 aa	Known RBP	4.08	□□□□□ -1.76
NHX1	YDR456W	ZRG8	P40021	1076 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	ICP55	P40051	511 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	AVT6	P40074	448 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	PEP8	P40335	379 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	ASG1	P40467	964 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	NAS2	P40555	220 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	SKP2	P42843	763 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	MSE1	P48525	536 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	MRPL13	Q02204	264 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	TY1A-MR1	Q04215	440 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	HSP31	Q04432	237 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	COA4	Q05809	96 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	VTA1	Q06263	330 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	YDL176W	Q12027	708 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	SNU23	Q12368	194 aa	Predicted RBP	4.08	□□□□□ -1.76
NHX1	YDR456W	ATG31	Q12421	196 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	RIF1	P29539	1916 aa		4.08	□□□□□ -1.76
NHX1	YDR456W	GPM1	P00950	247 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	ADE8	P04161	214 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	FUM1	P08417	488 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	CAP2	P13517	287 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	DBP3	P20447	523 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	PHO3	P24031	467 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	SGF29	P25554	259 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	YCL002C	P25565	263 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	GAR1	P28007	205 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	PEX3	P28795	441 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	HRR25	P29295	494 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	URA10	P30402	227 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	CYS3	P31373	394 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	PRO3	P32263	286 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	CYS4	P32582	507 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	YSC83	P32792	385 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	CLG1	P35190	452 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	ATG19	P35193	415 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	TEF4	P36008	412 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	MAE1	P36013	669 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	ARA1	P38115	344 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	PFF1	P38244	976 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	YJL068C	P40363	299 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	HPM1	P40481	377 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	FAR7	P43592	221 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	YJR124C	P47159	448 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	ECL1	P48235	211 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	MTR3	P48240	250 aa	Predicted RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	BIO5	P53744	561 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	ELA1	P53861	379 aa	Predicted RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	SLU7	Q02775	382 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	AIM33	Q04516	312 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	RNH1	Q04740	348 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	SNO4	Q04902	237 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	KAP95	Q06142	861 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	YDL073W	Q07454	984 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	HSP33	Q08914	237 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	HSP32	Q08992	237 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	RTK1	Q12100	620 aa	Predicted RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	GRX6	Q12438	231 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	SKM1	Q12469	655 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	ARG3	P05150	338 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
NHX1	YDR456W	APE1	P14904	514 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	ASF2	P32448	525 aa	Predicted RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	NGG1	P32494	702 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	PPQ1	P32945	549 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	CSG2	P35206	410 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	YKR051W	P36142	418 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	UTP30	P36144	274 aa	Known RBP	4.07	□□□□□ -1.76
NHX1	YDR456W	YBR139W	P38109	508 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	YDR089W	P38966	869 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	SWD1	P39706	426 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	FMP10	P40098	244 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	SWM2	P40342	146 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	HXT9	P40885	567 aa		4.07	□□□□□ -1.76
NHX1	YDR456W	ELP2	P42935	788 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms