RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	ATG29	Q12092	213 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	RLM1	Q12224	676 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	ECM29	P38737	1868 aa		4.58	□□□□□ -1.68
RPB7	YDR404C	CUP1-1	P0CX80	61 aa		4.58	□□□□□ -1.68
RPB7	YDR404C	CUP1-2	P0CX81	61 aa		4.58	□□□□□ -1.68
RPB7	YDR404C	KRS1	P15180	591 aa	Known RBP	4.58	□□□□□ -1.68
RPB7	YDR404C	TKL1	P23254	680 aa	Known RBP	4.58	□□□□□ -1.68
RPB7	YDR404C	YCR006C	P25350	157 aa		4.58	□□□□□ -1.68
RPB7	YDR404C	PMT1	P33775	817 aa		4.58	□□□□□ -1.68
RPB7	YDR404C	YJL068C	P40363	299 aa		4.58	□□□□□ -1.68
RPB7	YDR404C	YFL040W	P43562	540 aa		4.58	□□□□□ -1.68
RPB7	YDR404C	APT1	P49435	187 aa	Known RBP	4.58	□□□□□ -1.68
RPB7	YDR404C	SXM1	Q04175	944 aa	Known RBP	4.58	□□□□□ -1.68
RPB7	YDR404C	YLR345W	Q06137	509 aa		4.58	□□□□□ -1.68
RPB7	YDR404C	SLK19	Q08581	821 aa	Known RBP	4.58	□□□□□ -1.68
RPB7	YDR404C	YLR049C	Q12110	428 aa		4.58	□□□□□ -1.68
RPB7	YDR404C	CLB3	P24870	427 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	PRD1	P25375	712 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	IMG1	P25626	169 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	CDC60	P26637	1090 aa	Known RBP	4.57	□□□□□ -1.68
RPB7	YDR404C	MSS51	P32335	436 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	APD1	P38281	316 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	TAX4	P47030	604 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	NET1	P47035	1189 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	ORC5	P50874	479 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	SGF73	P53165	657 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	TWF1	P53250	332 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	YGR127W	P53275	312 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	THI7	Q05998	598 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	BSP1	Q06604	576 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	TEN1	Q07921	160 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	APL4	Q12028	832 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	ISA2	Q12425	185 aa		4.57	□□□□□ -1.68
RPB7	YDR404C	SWI1	P09547	1314 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	GPA1	P08539	472 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	RAP1	P11938	827 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	ART10	P18634	518 aa	Known RBP	4.56	□□□□□ -1.68
RPB7	YDR404C	GCS1	P35197	352 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	CMC1	P36064	111 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	STB6	P36085	766 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	NUP133	P36161	1157 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	PXL1	P36166	706 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	TSC10	P38342	320 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	LRP1	P38801	184 aa	Known RBP	4.56	□□□□□ -1.68
RPB7	YDR404C	PTR3	P43606	678 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	YMR178W	Q03219	274 aa	Known RBP	4.56	□□□□□ -1.68
RPB7	YDR404C	SNU56	Q03782	492 aa	Known RBP	4.56	□□□□□ -1.68
RPB7	YDR404C	FIN1	Q03898	291 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	RQC1	Q05468	723 aa	Known RBP	4.56	□□□□□ -1.68
RPB7	YDR404C	PDR8	Q06149	701 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	CFT2	Q12102	859 aa	Predicted RBP	4.56	□□□□□ -1.68
RPB7	YDR404C	YLR111W	Q12528	110 aa		4.56	□□□□□ -1.68
RPB7	YDR404C	ILS1	P09436	1072 aa	Known RBP	4.55	□□□□□ -1.68
RPB7	YDR404C	HOM2	P13663	365 aa	Known RBP	4.55	□□□□□ -1.68
RPB7	YDR404C	STE50	P25344	346 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	SAC1	P32368	623 aa	Known RBP	4.55	□□□□□ -1.68
RPB7	YDR404C	SWI3	P32591	825 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	ECM32	P32644	1121 aa	Known RBP	4.55	□□□□□ -1.68
RPB7	YDR404C	YBL055C	P34220	418 aa	Predicted RBP	4.55	□□□□□ -1.68
RPB7	YDR404C	OCT1	P35999	772 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	ICS2	P38284	255 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	OTU2	P38747	307 aa	Known RBP	4.55	□□□□□ -1.68
RPB7	YDR404C	ANS1	P38832	159 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	SSU1	P41930	458 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	YTP1	P53584	459 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	BNI5	P53890	448 aa	Known RBP	4.55	□□□□□ -1.68
RPB7	YDR404C	MSC1	Q03104	513 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	EMI2	Q04409	500 aa	Known RBP	4.55	□□□□□ -1.68
RPB7	YDR404C	ERB1	Q04660	807 aa	Known RBP	4.55	□□□□□ -1.68
RPB7	YDR404C	MCH4	Q08268	501 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	TY3A-G	Q12173	290 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	SEC39	Q12745	709 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	TY3A-I	Q99219	290 aa		4.55	□□□□□ -1.68
RPB7	YDR404C	TUS1	Q06412	1307 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	MDM10	P18409	493 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	APN1	P22936	367 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	BOS1	P25385	244 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	HOT13	P36078	116 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	DBP8	P38719	431 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	ARN1	P38731	627 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	HXT14	P42833	540 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	ERG26	P53199	349 aa	Known RBP	4.54	□□□□□ -1.68
RPB7	YDR404C	ASI1	P54074	624 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	RPA49	Q01080	415 aa	Predicted RBP	4.54	□□□□□ -1.68
RPB7	YDR404C	PIG1	Q06216	648 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	TPO3	Q06451	622 aa		4.54	□□□□□ -1.68
RPB7	YDR404C	RPS10A	Q08745	105 aa	Predicted RBP	4.54	□□□□□ -1.68
RPB7	YDR404C	HSP82	P02829	709 aa	Known RBP	4.53	□□□□□ -1.68
RPB7	YDR404C	PMS1	P14242	873 aa		4.53	□□□□□ -1.68
RPB7	YDR404C	CLB2	P24869	491 aa		4.53	□□□□□ -1.68
RPB7	YDR404C	ELO2	P25358	347 aa		4.53	□□□□□ -1.68
RPB7	YDR404C	YCR051W	P25631	222 aa		4.53	□□□□□ -1.68
RPB7	YDR404C	PAP1	P29468	568 aa	Known RBP	4.53	□□□□□ -1.68
RPB7	YDR404C	SEC66	P33754	206 aa		4.53	□□□□□ -1.68
RPB7	YDR404C	RPL32	P38061	130 aa	Known RBP	4.53	□□□□□ -1.68
RPB7	YDR404C	RFC1	P38630	861 aa	Known RBP	4.53	□□□□□ -1.68
RPB7	YDR404C	ARP1	P38696	384 aa		4.53	□□□□□ -1.68
RPB7	YDR404C	MSR1	P38714	643 aa		4.53	□□□□□ -1.68
RPB7	YDR404C	SNM1	P40993	198 aa		4.53	□□□□□ -1.68
RPB7	YDR404C	RSM23	Q01163	450 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms