RNA–Protein interactions for RNA: YDR280W

RRP45, Transcript of Exosome non-catalytic core component, yeast

Gene RRP45, Length 918 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP45	YDR280W	YRO2	P38079	344 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	NCL1	P38205	684 aa	Known RBP	4.93	□□□□□ -1.62
RRP45	YDR280W	BEM4	P39011	633 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	KHA1	P40309	873 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	ATM1	P40416	690 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	YIL165C	P40446	119 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	IRC6	P43615	237 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	DAM1	P53267	343 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	RBG2	P53295	368 aa	Known RBP	4.93	□□□□□ -1.62
RRP45	YDR280W	YNL165W	P53891	406 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	INN1	P53901	409 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	VPS9	P54787	451 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	YDR541C	Q03049	344 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	TPP1	Q03796	238 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	ADY3	Q07732	790 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	PSR1	Q07800	427 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	AKR2	Q12013	749 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	YOL107W	Q12239	342 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	HSH49	Q99181	213 aa	Predicted RBP	4.93	□□□□□ -1.62
RRP45	YDR280W	SEY1	Q99287	776 aa		4.93	□□□□□ -1.62
RRP45	YDR280W	ADE8	P04161	214 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	PHO2	P07269	559 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	SFA1	P32771	386 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	YKL077W	P36081	392 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	MCM7	P38132	845 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	AIM18	P38884	321 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	SAP1	P39955	897 aa	Known RBP	4.92	□□□□□ -1.62
RRP45	YDR280W	SEC27	P41811	889 aa	Known RBP	4.92	□□□□□ -1.62
RRP45	YDR280W	TES1	P41903	349 aa	Known RBP	4.92	□□□□□ -1.62
RRP45	YDR280W	TIM13	P53299	105 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	HST1	P53685	503 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	MRPL19	P53875	158 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	YDR132C	Q03900	495 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	RCO1	Q04779	684 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	ATG33	Q06485	197 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	IRC13	Q08630	104 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	AFT2	Q08957	416 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	HER1	Q12276	1246 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	YOL114C	Q12322	202 aa		4.92	□□□□□ -1.62
RRP45	YDR280W	GAL7	P08431	366 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	GFA1	P14742	717 aa	Known RBP	4.91	□□□□□ -1.62
RRP45	YDR280W	TRX1	P22217	103 aa	Known RBP	4.91	□□□□□ -1.62
RRP45	YDR280W	SAN1	P22470	610 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	YKT6	P36015	200 aa	Known RBP	4.91	□□□□□ -1.62
RRP45	YDR280W	CAB3	P36076	571 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	MMS21	P38632	267 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	TMN3	P40071	706 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	RIC1	P40395	1056 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	YIL166C	P40445	542 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	MPH1	P40562	993 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	ERR3	P42222	437 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	JHD2	P47156	728 aa	Predicted RBP	4.91	□□□□□ -1.62
RRP45	YDR280W	UPF3	P48412	387 aa	Known RBP	4.91	□□□□□ -1.62
RRP45	YDR280W	SKP1	P52286	194 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	BSC5	P53755	489 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	YNL247W	P53852	767 aa	Known RBP	4.91	□□□□□ -1.62
RRP45	YDR280W	PRO2	P54885	456 aa	Known RBP	4.91	□□□□□ -1.62
RRP45	YDR280W	MRS2	Q01926	470 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	ECM9	Q02202	377 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	EBS1	Q03466	884 aa	Known RBP	4.91	□□□□□ -1.62
RRP45	YDR280W	NUP53	Q03790	475 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	TAF11	Q04226	346 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	HLR1	Q04429	423 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	TDA9	Q04545	1251 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	ERV41	Q04651	352 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	YDR222W	Q04925	415 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	GLO2	Q05584	274 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	YPR071W	Q12346	211 aa		4.91	□□□□□ -1.62
RRP45	YDR280W	PNO1	Q99216	274 aa	Known RBP	4.91	□□□□□ -1.62
RRP45	YDR280W	SPO16	P17122	198 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RRP45	YDR280W	CLN1	P20437	546 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	KRE6	P32486	720 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	SLC1	P33333	303 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	DHR2	P36009	735 aa	Predicted RBP	4.9	□□□□□ -1.63
RRP45	YDR280W	MCX1	P38323	520 aa	Predicted RBP	4.9	□□□□□ -1.63
RRP45	YDR280W	UTP9	P38882	575 aa	Known RBP	4.9	□□□□□ -1.63
RRP45	YDR280W	YEL020C	P39994	560 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	AXL1	P40851	1208 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	RFX1	P48743	811 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	SAP4	P53036	818 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	YGR127W	P53275	312 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	CTK1	Q03957	528 aa	Known RBP	4.9	□□□□□ -1.63
RRP45	YDR280W	VTI1	Q04338	217 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	YKU80	Q04437	629 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	ARP9	Q05123	467 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	RSC2	Q06488	889 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	RSC3	Q06639	885 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	YLR149C	Q99296	730 aa		4.9	□□□□□ -1.63
RRP45	YDR280W	HMG1	P12683	1054 aa		4.89	□□□□□ -1.63
RRP45	YDR280W	YSP3	P25036	478 aa		4.89	□□□□□ -1.63
RRP45	YDR280W	BUB3	P26449	341 aa		4.89	□□□□□ -1.63
RRP45	YDR280W	BUD14	P27637	709 aa		4.89	□□□□□ -1.63
RRP45	YDR280W	RPC25	P35718	212 aa		4.89	□□□□□ -1.63
RRP45	YDR280W	AHP1	P38013	176 aa	Known RBP	4.89	□□□□□ -1.63
RRP45	YDR280W	ARL1	P38116	183 aa	Known RBP	4.89	□□□□□ -1.63
RRP45	YDR280W	YHR218W	P38899	603 aa		4.89	□□□□□ -1.63
RRP45	YDR280W	PLB1	P39105	664 aa		4.89	□□□□□ -1.63
RRP45	YDR280W	SPC72	P39723	622 aa		4.89	□□□□□ -1.63
RRP45	YDR280W	GIM4	P40005	111 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms