RNA–Protein interactions for RNA: YDR239C

YDR239C, Transcript of Protein of unknown function, yeast

Gene YDR239C, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR239C	YDR239C	TY1B-LR2	P0C2I5	1755 aa		2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-PR2	P0C2J0	1756 aa		2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-JR1	P47098	1755 aa		2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-ML2	Q03434	1755 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-ER1	Q03612	1755 aa		2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-ML1	Q04711	1755 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-GR2	Q12269	1755 aa		2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-OL	Q12273	1755 aa		2.53	□□□□□ -2
YDR239C	YDR239C	TY1B-PL	Q12414	1755 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	NUP159	P40477	1460 aa		2.53	□□□□□ -2
YDR239C	YDR239C	COB	P00163	385 aa		2.53	□□□□□ -2
YDR239C	YDR239C	RPS17A	P02407	136 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	RAD1	P06777	1100 aa		2.53	□□□□□ -2
YDR239C	YDR239C	MSF1	P08425	469 aa		2.53	□□□□□ -2
YDR239C	YDR239C	MSS18	P08593	268 aa		2.53	□□□□□ -2
YDR239C	YDR239C	YGL041W-A	P0C5N3	154 aa		2.53	□□□□□ -2
YDR239C	YDR239C	RAD18	P10862	487 aa		2.53	□□□□□ -2
YDR239C	YDR239C	PMR1	P13586	950 aa		2.53	□□□□□ -2
YDR239C	YDR239C	RPS17B	P14127	136 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	CDC23	P16522	626 aa		2.53	□□□□□ -2
YDR239C	YDR239C	CPR4	P25334	318 aa		2.53	□□□□□ -2
YDR239C	YDR239C	FUN26	P31381	517 aa		2.53	□□□□□ -2
YDR239C	YDR239C	SLC1	P33333	303 aa		2.53	□□□□□ -2
YDR239C	YDR239C	YOX1	P34161	385 aa		2.53	□□□□□ -2
YDR239C	YDR239C	SPT10	P35208	640 aa		2.53	□□□□□ -2
YDR239C	YDR239C	SCO2	P38072	301 aa		2.53	□□□□□ -2
YDR239C	YDR239C	FIG1	P38224	298 aa		2.53	□□□□□ -2
YDR239C	YDR239C	SPP381	P38282	291 aa	Predicted RBP	2.53	□□□□□ -2
YDR239C	YDR239C	IMD2	P38697	523 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	YHR097C	P38809	366 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	RGI2	P40188	164 aa		2.53	□□□□□ -2
YDR239C	YDR239C	EFM4	P40516	257 aa		2.53	□□□□□ -2
YDR239C	YDR239C	GVP36	P40531	326 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	OTU1	P43558	301 aa		2.53	□□□□□ -2
YDR239C	YDR239C	ALK1	P43633	760 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	RTT101	P47050	842 aa		2.53	□□□□□ -2
YDR239C	YDR239C	LSM8	P47093	109 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	SEH1	P53011	349 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	SGF73	P53165	657 aa		2.53	□□□□□ -2
YDR239C	YDR239C	SLI1	P53304	468 aa		2.53	□□□□□ -2
YDR239C	YDR239C	PDR16	P53860	351 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	YNL134C	P53912	376 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	DIA1	P54005	336 aa		2.53	□□□□□ -2
YDR239C	YDR239C	SLD5	Q03406	294 aa		2.53	□□□□□ -2
YDR239C	YDR239C	NHP10	Q03435	203 aa		2.53	□□□□□ -2
YDR239C	YDR239C	YDR239C	Q03780	787 aa		2.53	□□□□□ -2
YDR239C	YDR239C	YDR248C	Q03786	193 aa		2.53	□□□□□ -2
YDR239C	YDR239C	YMR074C	Q04773	145 aa		2.53	□□□□□ -2
YDR239C	YDR239C	HCR1	Q05775	265 aa	Known RBP	2.53	□□□□□ -2
YDR239C	YDR239C	TFC6	Q06339	672 aa		2.53	□□□□□ -2
YDR239C	YDR239C	SPO75	Q07798	868 aa		2.53	□□□□□ -2
YDR239C	YDR239C	GUP2	Q08929	609 aa		2.53	□□□□□ -2
YDR239C	YDR239C	TAF10	Q12030	206 aa		2.53	□□□□□ -2
YDR239C	YDR239C	ATG9	Q12142	997 aa		2.53	□□□□□ -2
YDR239C	YDR239C	RPN6	Q12377	434 aa		2.53	□□□□□ -2
YDR239C	YDR239C	SIR4	P11978	1358 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	BNR1	P40450	1375 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	SEM1	O94742	89 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	FLP1	P03870	423 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	TPK1	P06244	397 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	HMG2	P12684	1045 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	CBS1	P14066	229 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	GCN3	P14741	305 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	GFA1	P14742	717 aa	Known RBP	2.52	□□□□□ -2.01
YDR239C	YDR239C	SEC18	P18759	758 aa	Known RBP	2.52	□□□□□ -2.01
YDR239C	YDR239C	CKI1	P20485	582 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	RIT1	P23796	513 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	SYP1	P25623	870 aa	Known RBP	2.52	□□□□□ -2.01
YDR239C	YDR239C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.52	□□□□□ -2.01	not detected
YDR239C	YDR239C	THI80	P35202	319 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	RCN1	P36054	211 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	DAD2	P36162	133 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	AGP2	P38090	596 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.52	□□□□□ -2.01	not detected
YDR239C	YDR239C	MUP3	P38734	546 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	DPH1	P40487	425 aa	Known RBP	2.52	□□□□□ -2.01
YDR239C	YDR239C	INP51	P40559	946 aa	Known RBP	2.52	□□□□□ -2.01
YDR239C	YDR239C	PSA1	P41940	361 aa	Known RBP	2.52	□□□□□ -2.01
YDR239C	YDR239C	MRM2	P53123	320 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	CWC27	Q02770	301 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	YDC1	Q02896	317 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	RUB1	Q03919	77 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	COA4	Q05809	96 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	YLR297W	Q05899	129 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	YPR127W	Q06494	345 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	SDO1	Q07953	250 aa	Known RBP	2.52	□□□□□ -2.01
YDR239C	YDR239C	RFU1	Q08003	200 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	SGT1	Q08446	395 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	DIA2	Q08496	732 aa	Predicted RBP	2.52	□□□□□ -2.01
YDR239C	YDR239C	VAM3	Q12241	283 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	NCA2	Q12374	616 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	Q0144	Q9ZZW2	109 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	YRF1-1	P0CX20	1796 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	YRF1-5	P0CX21	1796 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	YRF1-8	P0CX22	1796 aa		2.52	□□□□□ -2.01
YDR239C	YDR239C	NHP6A	P11632	93 aa	Known RBP	2.52	□□□□□ -2.01
YDR239C	YDR239C	CNB1	P25296	175 aa		2.52	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms