RNA–Protein interactions for RNA: YDR200C

VPS64, Transcript of Protein required for cytoplasm to vacuole targeting of proteins, yeast

Gene VPS64, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS64	YDR200C	RPL1A	P0CX43	217 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	RPL1B	P0CX44	217 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	SCH9	P11792	824 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	RPS17B	P14127	136 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	THR1	P17423	357 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	PMA2	P19657	947 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	PRP28	P23394	588 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	FEN2	P25621	512 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	CIN8	P27895	1000 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	BLI1	P35727	113 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	TAE1	P38340	232 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	LRP1	P38801	184 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	HXT6	P39003	570 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	HXT7	P39004	570 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	YJL206C	P39529	758 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	SNM1	P40993	198 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	QRI1	P43123	477 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	BIT61	P47041	543 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	ASN2	P49090	572 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	EMC4	P53073	190 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	TEP1	P53916	434 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	NGL3	Q03210	505 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	ENT5	Q03769	411 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	YML096W	Q04489	525 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	SWC7	Q06707	132 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	CMS1	Q07897	291 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	PGC1	Q08959	321 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	MLH3	Q12083	715 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	RRP6	Q12149	733 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	YDR061W	Q12298	539 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	RKM5	Q12367	367 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	YIL046W-A	Q3E7Z4	54 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	RIP1	P08067	215 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	RPS21A	P0C0V8	87 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	GLN4	P13188	809 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	ABF1	P14164	731 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	DAL82	P21705	255 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	DMC1	P25453	334 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	DBF4	P32325	704 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	RAD5	P32849	1169 aa	Predicted RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	OAF3	P36023	863 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	ALY1	P36117	915 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	MRPL10	P36520	322 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	HIS2	P38635	335 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	STN1	P38960	494 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	ELO1	P39540	310 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	RPH1	P39956	796 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	PAN6	P40459	309 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	PXA1	P41909	870 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	YFR018C	P43599	363 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	RRT5	P43607	289 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	ROK1	P45818	564 aa	Predicted RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	BUD13	P46947	266 aa	Predicted RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	NBP35	P52920	328 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	VPS75	P53853	264 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	ATG4	P53867	494 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	YNL143C	P53908	130 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	INA17	Q02888	182 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
VPS64	YDR200C	AAD15	Q08361	143 aa		2.75	□□□□□ -1.97
VPS64	YDR200C	STT4	P37297	1900 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	PMS1	P14242	873 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	STE4	P18851	423 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	UBA1	P22515	1024 aa	Known RBP	2.74	□□□□□ -1.97
VPS64	YDR200C	MEI4	P29467	408 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	NTH1	P32356	751 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	GLG1	P36143	616 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	RKM3	P38222	552 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	UBS1	P38290	277 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	COS111	P38308	924 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	TDP1	P38319	544 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	PCA1	P38360	1216 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	SRP72	P38688	640 aa	Known RBP	2.74	□□□□□ -1.97
VPS64	YDR200C	KHA1	P40309	873 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	MPS3	P47069	682 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	STR3	P53101	465 aa	Known RBP	2.74	□□□□□ -1.97
VPS64	YDR200C	YGL108C	P53139	140 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	RTS3	P53289	263 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	CSL4	P53859	292 aa	Predicted RBP	2.74	□□□□□ -1.97
VPS64	YDR200C	MET14	Q02196	202 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	THI7	Q05998	598 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	ATG10	Q07879	167 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	LDB18	Q07887	179 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	VPS68	Q12016	184 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	DAS2	Q12084	232 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	OCA6	Q12454	224 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	SKM1	Q12469	655 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	RMP1	Q12530	201 aa		2.74	□□□□□ -1.97
VPS64	YDR200C	TRA1	P38811	3744 aa		2.73	□□□□□ -1.97
VPS64	YDR200C	COX5A	P00424	153 aa		2.73	□□□□□ -1.97
VPS64	YDR200C	SPO12	P17123	173 aa		2.73	□□□□□ -1.97
VPS64	YDR200C	SCL1	P21243	252 aa	Known RBP	2.73	□□□□□ -1.97
VPS64	YDR200C	CWP1	P28319	239 aa		2.73	□□□□□ -1.97
VPS64	YDR200C	PLC1	P32383	869 aa		2.73	□□□□□ -1.97
VPS64	YDR200C	AEP1	P32493	518 aa		2.73	□□□□□ -1.97
VPS64	YDR200C	MRS6	P32864	603 aa	Known RBP	2.73	□□□□□ -1.97
VPS64	YDR200C	MIC60	P36112	540 aa		2.73	□□□□□ -1.97
VPS64	YDR200C	SET3	P36124	751 aa		2.73	□□□□□ -1.97
VPS64	YDR200C	FAT1	P38225	669 aa		2.73	□□□□□ -1.97
VPS64	YDR200C	PPE1	P38796	400 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms