RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C THP1Q08231 455 aa4.03□□□□□ -1.76
SHU2YDR078C RAV1P47104 1357 aa4.02□□□□□ -1.77
SHU2YDR078C YAP1P19880 650 aaKnown RBP4.02□□□□□ -1.77
SHU2YDR078C SPB1P25582 841 aaPredicted RBP4.02□□□□□ -1.77
SHU2YDR078C PIM1P36775 1133 aa4.02□□□□□ -1.77
SHU2YDR078C MBB1P39534 108 aa4.02□□□□□ -1.77
SHU2YDR078C VRG4P40107 337 aa4.02□□□□□ -1.77
SHU2YDR078C YPT11P48559 417 aa4.02□□□□□ -1.77
SHU2YDR078C SMM1P53720 384 aaKnown RBP4.02□□□□□ -1.77
SHU2YDR078C SHR3Q02774 210 aa4.02□□□□□ -1.77
SHU2YDR078C SEG1Q04279 960 aa4.02□□□□□ -1.77
SHU2YDR078C RDR1Q08904 546 aa4.02□□□□□ -1.77
SHU2YDR078C AFT2Q08957 416 aa4.02□□□□□ -1.77
SHU2YDR078C PDH1Q12428 516 aaKnown RBP4.02□□□□□ -1.77
SHU2YDR078C PAR32Q12515 295 aaKnown RBP4.02□□□□□ -1.77
SHU2YDR078C PEP5P12868 1029 aa4.01□□□□□ -1.77
SHU2YDR078C YIM1P28625 365 aa4.01□□□□□ -1.77
SHU2YDR078C SNC1P31109 117 aa4.01□□□□□ -1.77
SHU2YDR078C AFG1P32317 509 aa4.01□□□□□ -1.77
SHU2YDR078C THI2P38141 450 aa4.01□□□□□ -1.77
SHU2YDR078C RRT2P38332 387 aa4.01□□□□□ -1.77
SHU2YDR078C TIF4631P39935 952 aaKnown RBP4.01□□□□□ -1.77
SHU2YDR078C LCB2P40970 561 aa4.01□□□□□ -1.77
SHU2YDR078C URB2P47108 1174 aa4.01□□□□□ -1.77
SHU2YDR078C YGR149WP48236 432 aa4.01□□□□□ -1.77
SHU2YDR078C FMS1P50264 508 aa4.01□□□□□ -1.77
SHU2YDR078C BUD32P53323 261 aa4.01□□□□□ -1.77
SHU2YDR078C RHO4Q00246 291 aa4.01□□□□□ -1.77
SHU2YDR078C OAZ1Q02803 292 aa4.01□□□□□ -1.77
SHU2YDR078C RRP45Q05636 305 aaKnown RBP4.01□□□□□ -1.77
SHU2YDR078C COQ11Q05892 277 aa4.01□□□□□ -1.77
SHU2YDR078C SIL1Q08199 421 aa4.01□□□□□ -1.77
SHU2YDR078C YLR112WQ12130 139 aa4.01□□□□□ -1.77
SHU2YDR078C YNL162W-AQ3E7A8 72 aa4.01□□□□□ -1.77
SHU2YDR078C BRR1Q99177 341 aaPredicted RBP4.01□□□□□ -1.77
SHU2YDR078C RAD52P06778 471 aaKnown RBP4□□□□□ -1.77
SHU2YDR078C RHO2P06781 192 aa4□□□□□ -1.77
SHU2YDR078C MNE1P24720 663 aa4□□□□□ -1.77
SHU2YDR078C MDL1P33310 695 aa4□□□□□ -1.77
SHU2YDR078C BNA4P38169 460 aa4□□□□□ -1.77
SHU2YDR078C TCM62P38228 572 aaKnown RBP4□□□□□ -1.77
SHU2YDR078C RXT2P38255 430 aa4□□□□□ -1.77
SHU2YDR078C NTC20P38302 140 aaPredicted RBP4□□□□□ -1.77
SHU2YDR078C GDI1P39958 451 aaKnown RBP4□□□□□ -1.77
SHU2YDR078C YJL055WP47044 245 aa4□□□□□ -1.77
SHU2YDR078C YJR154WP47181 346 aa4□□□□□ -1.77
SHU2YDR078C YGL138CP53122 345 aa4□□□□□ -1.77
SHU2YDR078C SKO1Q02100 647 aa4□□□□□ -1.77
SHU2YDR078C YPL014WQ02606 381 aa4□□□□□ -1.77
SHU2YDR078C NUP100Q02629 959 aa4□□□□□ -1.77
SHU2YDR078C RIM13Q03792 727 aa4□□□□□ -1.77
SHU2YDR078C GYL1Q04322 720 aa4□□□□□ -1.77
SHU2YDR078C SSK1Q07084 712 aa4□□□□□ -1.77
SHU2YDR078C GPM3Q12326 303 aa4□□□□□ -1.77
SHU2YDR078C SGV1P23293 657 aaKnown RBP3.99□□□□□ -1.77
SHU2YDR078C GID7P25569 745 aa3.99□□□□□ -1.77
SHU2YDR078C NIP100P33420 868 aa3.99□□□□□ -1.77
SHU2YDR078C MSN2P33748 704 aa3.99□□□□□ -1.77
SHU2YDR078C DUG2P38149 878 aa3.99□□□□□ -1.77
SHU2YDR078C SLM4P38247 162 aa3.99□□□□□ -1.77
SHU2YDR078C KEL1P38853 1164 aaKnown RBP3.99□□□□□ -1.77
SHU2YDR078C YMR147WP40218 223 aaKnown RBP3.99□□□□□ -1.77
SHU2YDR078C SEC28P40509 296 aaKnown RBP3.99□□□□□ -1.77
SHU2YDR078C PSA1P41940 361 aaKnown RBP3.99□□□□□ -1.77
SHU2YDR078C COS5P47187 383 aa3.99□□□□□ -1.77
SHU2YDR078C OCA1P50946 238 aaPredicted RBP3.99□□□□□ -1.77
SHU2YDR078C ZPR1P53303 486 aaKnown RBP3.99□□□□□ -1.77
SHU2YDR078C ECI1Q05871 280 aa3.99□□□□□ -1.77
SHU2YDR078C COS7Q07788 383 aa3.99□□□□□ -1.77
SHU2YDR078C CTF3Q12748 733 aa3.99□□□□□ -1.77
SHU2YDR078C SUC2P00724 532 aa3.98□□□□□ -1.77
SHU2YDR078C GPH1P06738 902 aaKnown RBP3.98□□□□□ -1.77
SHU2YDR078C YER190C-BP0CX94 160 aa3.98□□□□□ -1.77
SHU2YDR078C YEL077W-AP0CX95 160 aa3.98□□□□□ -1.77
SHU2YDR078C YGR296C-BP0CX96 160 aa3.98□□□□□ -1.77
SHU2YDR078C YPL283W-BP0CX97 160 aa3.98□□□□□ -1.77
SHU2YDR078C YPR204C-AP0CX98 160 aa3.98□□□□□ -1.77
SHU2YDR078C NAT1P12945 854 aaKnown RBP3.98□□□□□ -1.77
SHU2YDR078C TYR1P20049 452 aa3.98□□□□□ -1.77
SHU2YDR078C RPS2P25443 254 aaKnown RBP3.98□□□□□ -1.77
SHU2YDR078C PUP2P32379 260 aa3.98□□□□□ -1.77
SHU2YDR078C VPH1P32563 840 aaKnown RBP3.98□□□□□ -1.77
SHU2YDR078C ARA1P38115 344 aa3.98□□□□□ -1.77
SHU2YDR078C FLO5P38894 1075 aa3.98□□□□□ -1.77
SHU2YDR078C IAH1P41734 238 aa3.98□□□□□ -1.77
SHU2YDR078C GAT1P43574 510 aa3.98□□□□□ -1.77
SHU2YDR078C ALT2P52892 507 aa3.98□□□□□ -1.77
SHU2YDR078C YNL234WP53857 426 aa3.98□□□□□ -1.77
SHU2YDR078C YNL181WP53878 407 aa3.98□□□□□ -1.77
SHU2YDR078C RPL15BP54780 204 aaPredicted RBP3.98□□□□□ -1.77
SHU2YDR078C HOT1Q03213 719 aa3.98□□□□□ -1.77
SHU2YDR078C IZH1Q03419 316 aa3.98□□□□□ -1.77
SHU2YDR078C EKI1Q03764 534 aa3.98□□□□□ -1.77
SHU2YDR078C THI7Q05998 598 aa3.98□□□□□ -1.77
SHU2YDR078C YAP7Q08182 245 aa3.98□□□□□ -1.77
SHU2YDR078C GSH2Q08220 491 aa3.98□□□□□ -1.77
SHU2YDR078C APL5Q08951 932 aaKnown RBP3.98□□□□□ -1.77
SHU2YDR078C ATX2Q12067 313 aa3.98□□□□□ -1.77
SHU2YDR078C SPE3Q12074 293 aaKnown RBP3.98□□□□□ -1.77
SHU2YDR078C ICT1Q12385 394 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms