RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C SDT1P53078 280 aa2.64□□□□□ -1.99
ASM4YDL088C BTN2P53286 410 aa2.64□□□□□ -1.99
ASM4YDL088C MSC1Q03104 513 aa2.64□□□□□ -1.99
ASM4YDL088C SSE2P32590 693 aaKnown RBP2.63□□□□□ -1.99
ASM4YDL088C MTC6P38849 526 aa2.63□□□□□ -1.99
ASM4YDL088C YHR210CP38893 341 aa2.63□□□□□ -1.99
ASM4YDL088C BSC5P53755 489 aa2.63□□□□□ -1.99
ASM4YDL088C PHO92Q06390 306 aa2.63□□□□□ -1.99
ASM4YDL088C LUC7Q07508 261 aaPredicted RBP2.63□□□□□ -1.99
ASM4YDL088C TMC1Q08422 150 aaPredicted RBP2.63□□□□□ -1.99
ASM4YDL088C HHF1P02309 103 aaKnown RBP2.62□□□□□ -1.99
ASM4YDL088C RAD52P06778 471 aaKnown RBP2.62□□□□□ -1.99
ASM4YDL088C YIH1P25637 258 aa2.62□□□□□ -1.99
ASM4YDL088C UTR4P32626 227 aa2.62□□□□□ -1.99
ASM4YDL088C SRO77P38163 1010 aa2.62□□□□□ -1.99
ASM4YDL088C PTH1P38876 190 aaKnown RBP2.62□□□□□ -1.99
ASM4YDL088C SIP4P46954 829 aa2.62□□□□□ -1.99
ASM4YDL088C GWT1P47026 490 aa2.62□□□□□ -1.99
ASM4YDL088C NCE102Q12207 173 aaRIP-Chip data2.62□□□□□ -1.99not detected
ASM4YDL088C HSH49Q99181 213 aaPredicted RBP2.62□□□□□ -1.99
ASM4YDL088C FUM1P08417 488 aaKnown RBP2.61□□□□□ -1.99
ASM4YDL088C YIL067CP40514 678 aa2.61□□□□□ -1.99
ASM4YDL088C GPI1P53306 609 aa2.61□□□□□ -1.99
ASM4YDL088C YML037CQ03703 340 aa2.61□□□□□ -1.99
ASM4YDL088C RRN11Q04712 507 aa2.61□□□□□ -1.99
ASM4YDL088C PBA1Q05778 276 aa2.61□□□□□ -1.99
ASM4YDL088C YOR365CQ08844 703 aa2.61□□□□□ -1.99
ASM4YDL088C RRN3P36070 627 aa2.61□□□□□ -1.99
ASM4YDL088C YBL029WP38201 376 aa2.61□□□□□ -1.99
ASM4YDL088C RFS1P38234 210 aaKnown RBP2.61□□□□□ -1.99
ASM4YDL088C YGR210CP42942 411 aa2.61□□□□□ -1.99
ASM4YDL088C APT1P49435 187 aaKnown RBP2.61□□□□□ -1.99
ASM4YDL088C PIR3Q03180 325 aa2.61□□□□□ -1.99
ASM4YDL088C ATG16Q03818 150 aa2.61□□□□□ -1.99
ASM4YDL088C THP1Q08231 455 aa2.61□□□□□ -1.99
ASM4YDL088C FMP40Q08968 688 aaPredicted RBP2.61□□□□□ -1.99
ASM4YDL088C SHP1P34223 423 aa2.6□□□□□ -1.99
ASM4YDL088C LCL3P53153 274 aa2.6□□□□□ -1.99
ASM4YDL088C YGL039WP53183 348 aaKnown RBP2.6□□□□□ -1.99
ASM4YDL088C DRN1P53255 507 aaKnown RBP2.6□□□□□ -1.99
ASM4YDL088C ELP3Q02908 557 aaKnown RBP2.6□□□□□ -1.99
ASM4YDL088C VMS1Q04311 632 aaKnown RBP2.6□□□□□ -1.99
ASM4YDL088C SGS1P35187 1447 aa2.59□□□□□ -1.99
ASM4YDL088C SUC2P00724 532 aa2.59□□□□□ -1.99
ASM4YDL088C PEP4P07267 405 aaKnown RBP2.59□□□□□ -1.99
ASM4YDL088C ART10P18634 518 aaKnown RBP2.59□□□□□ -1.99
ASM4YDL088C RNA14P25298 677 aaKnown RBP2.59□□□□□ -1.99
ASM4YDL088C POL4P25615 582 aa2.59□□□□□ -1.99
ASM4YDL088C HXT1P32465 570 aa2.59□□□□□ -1.99
ASM4YDL088C RSM22P36056 628 aa2.59□□□□□ -1.99
ASM4YDL088C BNA4P38169 460 aa2.59□□□□□ -1.99
ASM4YDL088C CAF40P53829 373 aa2.59□□□□□ -1.99
ASM4YDL088C ARK1P53974 638 aa2.59□□□□□ -1.99
ASM4YDL088C YSA1Q01976 231 aa2.59□□□□□ -1.99
ASM4YDL088C HIP1P06775 603 aa2.58□□□□□ -2
ASM4YDL088C HEM15P16622 393 aa2.58□□□□□ -2
ASM4YDL088C YIM1P28625 365 aa2.58□□□□□ -2
ASM4YDL088C ALK1P43633 760 aaKnown RBP2.58□□□□□ -2
ASM4YDL088C IPI3P53877 555 aa2.58□□□□□ -2
ASM4YDL088C TOF2Q02208 771 aa2.58□□□□□ -2
ASM4YDL088C ESA1Q08649 445 aa2.58□□□□□ -2
ASM4YDL088C RRG7Q08774 242 aaPredicted RBP2.58□□□□□ -2
ASM4YDL088C MRP13P12686 339 aa2.57□□□□□ -2
ASM4YDL088C DUG2P38149 878 aa2.57□□□□□ -2
ASM4YDL088C IES5P40060 125 aa2.57□□□□□ -2
ASM4YDL088C TPM2P40414 161 aa2.57□□□□□ -2
ASM4YDL088C DPH1P40487 425 aaKnown RBP2.57□□□□□ -2
ASM4YDL088C MHR1Q06630 226 aa2.57□□□□□ -2
ASM4YDL088C YPL272CQ08984 517 aa2.57□□□□□ -2
ASM4YDL088C CFT2Q12102 859 aaPredicted RBP2.57□□□□□ -2
ASM4YDL088C TMS1Q12116 473 aa2.57□□□□□ -2
ASM4YDL088C ERV2Q12284 196 aa2.57□□□□□ -2
ASM4YDL088C SUP35P05453 685 aaKnown RBP2.57□□□□□ -2
ASM4YDL088C EST1P17214 699 aaPredicted RBP2.57□□□□□ -2
ASM4YDL088C YCK1P23291 538 aa2.57□□□□□ -2
ASM4YDL088C LSB5P25369 354 aa2.57□□□□□ -2
ASM4YDL088C ARO2P28777 376 aaKnown RBP2.57□□□□□ -2
ASM4YDL088C SWD3P38123 315 aa2.57□□□□□ -2
ASM4YDL088C TIF4631P39935 952 aaKnown RBP2.57□□□□□ -2
ASM4YDL088C YJR008WP47085 338 aa2.57□□□□□ -2
ASM4YDL088C TIS11P47977 285 aa2.57□□□□□ -2
ASM4YDL088C ZPR1P53303 486 aaKnown RBP2.57□□□□□ -2
ASM4YDL088C RBS1Q05672 457 aaKnown RBP2.57□□□□□ -2
ASM4YDL088C HRT3Q12347 344 aa2.57□□□□□ -2
ASM4YDL088C CLN3P13365 580 aa2.56□□□□□ -2
ASM4YDL088C GLK1P17709 500 aaKnown RBP2.56□□□□□ -2
ASM4YDL088C PAP1P29468 568 aaKnown RBP2.56□□□□□ -2
ASM4YDL088C FRE2P36033 711 aa2.56□□□□□ -2
ASM4YDL088C NAT2P37293 288 aa2.56□□□□□ -2
ASM4YDL088C TCM62P38228 572 aaKnown RBP2.56□□□□□ -2
ASM4YDL088C FAU1P40099 211 aa2.56□□□□□ -2
ASM4YDL088C ALG5P40350 334 aa2.56□□□□□ -2
ASM4YDL088C LYS14P40971 790 aa2.56□□□□□ -2
ASM4YDL088C COQ9Q05779 260 aa2.56□□□□□ -2
ASM4YDL088C SPE4Q12455 300 aa2.56□□□□□ -2
ASM4YDL088C CHS1P08004 1131 aa2.55□□□□□ -2
ASM4YDL088C KAR3P17119 729 aa2.55□□□□□ -2
ASM4YDL088C CPR4P25334 318 aa2.55□□□□□ -2
ASM4YDL088C NDI1P32340 513 aa2.55□□□□□ -2
ASM4YDL088C SEF1P34228 1148 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms