RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	MRE11	P32829	692 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	UBP13	P38187	747 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	PFF1	P38244	976 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	SEC31	P38968	1273 aa	Known RBP	3.41	□□□□□ -1.86
CMD1	YBR109C	ERP2	P39704	215 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	CSM2	P40465	213 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	ASG1	P40467	964 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	BPL1	P48445	690 aa	Predicted RBP	3.41	□□□□□ -1.86
CMD1	YBR109C	KAP114	P53067	1004 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	RPT4	P53549	437 aa	Known RBP	3.41	□□□□□ -1.86
CMD1	YBR109C	MDM1	Q01846	1127 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	YPL071C	Q02864	156 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	IRC4	Q03036	179 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	PRP3	Q03338	469 aa	Predicted RBP	3.41	□□□□□ -1.86
CMD1	YBR109C	RAD30	Q04049	632 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	SPC24	Q04477	213 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	ERV41	Q04651	352 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	ECI1	Q05871	280 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	RIX7	Q07844	837 aa	Known RBP	3.41	□□□□□ -1.86
CMD1	YBR109C	YPL225W	Q08971	146 aa	Known RBP	3.41	□□□□□ -1.86
CMD1	YBR109C	KEL3	Q08979	651 aa	Predicted RBP	3.41	□□□□□ -1.86
CMD1	YBR109C	FRE7	Q12333	620 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	GRX6	Q12438	231 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	SEC39	Q12745	709 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	FIG2	P25653	1609 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	YBR085C-A	O43137	85 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	SUI3	P09064	285 aa	Known RBP	3.4	□□□□□ -1.87
CMD1	YBR109C	HSC82	P15108	705 aa	Known RBP	3.4	□□□□□ -1.87
CMD1	YBR109C	PRP16	P15938	1071 aa	Predicted RBP	3.4	□□□□□ -1.87
CMD1	YBR109C	KAR3	P17119	729 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	PRE8	P23639	250 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	RCK2	P38623	610 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	INA22	P40576	216 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	TOS3	P43637	560 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	DUO1	P53168	247 aa	Known RBP	3.4	□□□□□ -1.87
CMD1	YBR109C	YGL036W	P53185	909 aa	Predicted RBP	3.4	□□□□□ -1.87
CMD1	YBR109C	ATP23	P53722	227 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	RSM28	Q03430	361 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	PRP42	Q03776	544 aa	Known RBP	3.4	□□□□□ -1.87
CMD1	YBR109C	SNU56	Q03782	492 aa	Known RBP	3.4	□□□□□ -1.87
CMD1	YBR109C	URH1	Q04179	340 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	SKG3	Q06315	1026 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	TPO3	Q06451	622 aa		3.4	□□□□□ -1.87
CMD1	YBR109C	MYO1	P08964	1928 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	SNF3	P10870	884 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	PMR1	P13586	950 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	MRPS28	P21771	286 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	LCB1	P25045	558 aa	Known RBP	3.39	□□□□□ -1.87
CMD1	YBR109C	NIP1	P32497	812 aa	Known RBP	3.39	□□□□□ -1.87
CMD1	YBR109C	TOA1	P32773	286 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	SOF1	P33750	489 aa	Known RBP	3.39	□□□□□ -1.87
CMD1	YBR109C	RPC25	P35718	212 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	LHS1	P36016	881 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	FZO1	P38297	855 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	TIF5	P38431	405 aa	Known RBP	3.39	□□□□□ -1.87
CMD1	YBR109C	CCT2	P39076	527 aa	Known RBP	3.39	□□□□□ -1.87
CMD1	YBR109C	ECM10	P39987	644 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	JHD1	P40034	492 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	MRX1	P40050	688 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	RPN11	P43588	306 aa	Known RBP	3.39	□□□□□ -1.87
CMD1	YBR109C	ESBP6	P53918	673 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	NCS2	P53923	493 aa	Predicted RBP	3.39	□□□□□ -1.87
CMD1	YBR109C	UTP6	Q02354	440 aa	Known RBP	3.39	□□□□□ -1.87
CMD1	YBR109C	SHR3	Q02774	210 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	INA17	Q02888	182 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	FUS2	Q05670	677 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	CUR1	Q06469	252 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	RLP24	Q07915	199 aa	Known RBP	3.39	□□□□□ -1.87
CMD1	YBR109C	YBR126W-A	Q8TGU7	68 aa		3.39	□□□□□ -1.87
CMD1	YBR109C	YLR462W	O13556	202 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	PGK1	P00560	416 aa	Known RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	ILS1	P09436	1072 aa	Known RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	CLN3	P13365	580 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	PMS1	P14242	873 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	NUP1	P20676	1076 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	ISY1	P21374	235 aa	Predicted RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	APN1	P22936	367 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	YCR051W	P25631	222 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	PAP1	P29468	568 aa	Known RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	PRO3	P32263	286 aa	Known RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	SSE1	P32589	693 aa	Known RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.38	□□□□□ -1.87	not detected
CMD1	YBR109C	HIS2	P38635	335 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	YHL049C	P38722	271 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	SPL2	P38839	148 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	TIF4631	P39935	952 aa	Known RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	YEL075C	P39972	122 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	YER189W	P40104	122 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	GPD2	P41911	440 aa	Known RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	YFL064C	P43540	174 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	ORC5	P50874	479 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	ZPR1	P53303	486 aa	Known RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	SPO19	Q03029	223 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	ERO1	Q03103	563 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	RSC9	Q03124	581 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	YLR297W	Q05899	129 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	ORM2	Q06144	216 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	CMS1	Q07897	291 aa	Known RBP	3.38	□□□□□ -1.87
CMD1	YBR109C	MLH2	Q07980	695 aa		3.38	□□□□□ -1.87
CMD1	YBR109C	TCO89	Q08921	799 aa		3.38	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms