RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 CALM1P0DP23 149 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 CALM2P0DP24 149 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 CALM3P0DP25 149 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 RXRAP19793 462 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 CALML3P27482 149 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 KIF5BP33176 963 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 GHRHRQ02643 423 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 APOA5Q6Q788 366 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 DHX32Q7L7V1 743 aaKnown RBP12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 MICU3Q86XE3 530 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 HOMER1Q86YM7 354 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 RGS22Q8NE09 1264 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 PIGSQ96S52 555 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 AMNQ9BXJ7 453 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 XPNPEP3Q9NQH7 507 aa12.9□□□□□ -0.34
SRP54-AS1-205ENST00000636540 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 ADAMTS4O75173 837 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 HMGB1P09429 215 aaKnown RBP12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 EDNRBP24530 442 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 LRRC41Q15345 812 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 CCDC144BQ3MJ40 725 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 GJC2Q5T442 439 aaPredicted RBP12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 RAB11FIP4Q86YS3 637 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 FBXO16Q8IX29 292 aaPredicted RBP12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 DNERQ8NFT8 737 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 COL20A1Q9P218 1284 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 ADD3Q9UEY8 706 aaKnown RBP12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 FAM184BQ9ULE4 1060 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 MRPL11Q9Y3B7 192 aaKnown RBP12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 SLC12A7Q9Y666 1083 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 NID2Q14112 1375 aa12.89□□□□□ -0.35
SRP54-AS1-205ENST00000636540 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 PNMA6FA0A0J9YX94 578 aa12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 PGK1P00558 417 aa12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 CPA1P15085 419 aa12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 HSD17B4P51659 736 aa12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 TMTC3Q6ZXV5 915 aa12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 MCF2L2Q86YR7 1114 aa12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 ARRDC4Q8NCT1 418 aa12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 VTA1Q9NP79 307 aa12.88□□□□□ -0.35
SRP54-AS1-205ENST00000636540 MYADML2A6NDP7 307 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 DUSP11O75319 330 aaKnown RBP12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 CST5P28325 142 aaPredicted RBP12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 SMARCA1P28370 1054 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 ADCYAP1R1P41586 468 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 GNAQP50148 359 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 RCAN1P53805 252 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 LRRC26Q2I0M4 334 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 TAPT1Q6NXT6 567 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 SRBD1Q8N5C6 995 aaKnown RBP12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 SYTL5Q8TDW5 730 aaPredicted RBP12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 TBC1D5Q92609 795 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 DPF3Q92784 378 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 LZTS2Q9BRK4 669 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 USP26Q9BXU7 913 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 PHF24Q9UPV7 400 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 PCDHA1Q9Y5I3 950 aa12.87□□□□□ -0.35
SRP54-AS1-205ENST00000636540 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 EVI5O60447 810 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 CFBP00751 764 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 CASTP20810 708 aaKnown RBP12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 TRAF1Q13077 416 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 SNX17Q15036 470 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 EEPD1Q7L9B9 569 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 RNF180Q86T96 592 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 TLK2Q86UE8 772 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 CMTR1Q8N1G2 835 aaKnown RBP12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 FBXL16Q8N461 479 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 KLHDC9Q8NEP7 349 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 AGXT2Q9BYV1 514 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 SENP6Q9GZR1 1112 aaPredicted RBP12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 PDGFCQ9NRA1 345 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 RBM28Q9NW13 759 aaKnown RBP12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 GNEQ9Y223 722 aaKnown RBP12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 RANBP2P49792 3224 aaKnown RBP12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 FRMPD4Q14CM0 1322 aa12.86□□□□□ -0.35
SRP54-AS1-205ENST00000636540 A0A1W2PQ45 241 aaPredicted RBP12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 A0A1W2PQY0 241 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 GOLGA8AA7E2F4 631 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 GOLGA8BA8MQT2 603 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 H0YGN5 161 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 CTAGE5O15320 804 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 ZBTB43O43298 467 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 PTGS1P23219 599 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 GJA9P57773 515 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 NKX3-2P78367 333 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 IRX5P78411 483 aaPredicted RBP12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 TNFAIP2Q03169 654 aa12.85□□□□□ -0.35
SRP54-AS1-205ENST00000636540 PDE4DQ08499 809 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms