RNA–Protein interactions for RNA: ENST00000597687.1

SH2D3A-207, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 859 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-207ENST00000597687 RNF41Q9H4P4 317 aaPredicted RBP17.24■□□□□ 0.35
SH2D3A-207ENST00000597687 ANAPC4Q9UJX5 808 aa17.24■□□□□ 0.35
SH2D3A-207ENST00000597687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.24■□□□□ 0.35
SH2D3A-207ENST00000597687 B4GALT4O60513 344 aa17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 CALML3P27482 149 aa17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 RFC2P35250 354 aa17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 PBX2P40425 430 aa17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 MRPS5P82675 430 aaKnown RBP17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 MUM1L1Q5H9M0 696 aa17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 RNF207Q6ZRF8 634 aa17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 TICAM2Q86XR7 235 aa17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 MTG1Q9BT17 334 aaPredicted RBP17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 NOC4LQ9BVI4 516 aaKnown RBP17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 ALDH8A1Q9H2A2 487 aaPredicted RBP17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 NKX2-4Q9H2Z4 354 aa17.23■□□□□ 0.35
SH2D3A-207ENST00000597687 TNKSO95271 1327 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 GRXCR1A8MXD5 290 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 KIF28PB7ZC32 967 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 CTAGE5O15320 804 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 NMT2O60551 498 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 ATP2A2P16615 1042 aaKnown RBP17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 NT5C2P49902 561 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 SNAP25P60880 206 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 IRX5P78411 483 aaPredicted RBP17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 BFSP2Q13515 415 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 BAATQ14032 418 aaPredicted RBP17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 SCFD2Q8WU76 684 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 TRPV6Q9H1D0 765 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 PCDHA11Q9Y5I1 949 aa17.22■□□□□ 0.35
SH2D3A-207ENST00000597687 ASTN1O14525 1302 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 FRMPD2Q68DX3 1309 aaPredicted RBP17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 PSMC6P62333 389 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 SKIV2LQ15477 1246 aaKnown RBP17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 MCMDC2Q4G0Z9 681 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 CCDC178Q5BJE1 867 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 MFSD6Q6ZSS7 791 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 C16orf59Q7L2K0 433 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 DNERQ8NFT8 737 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 GPCPD1Q9NPB8 672 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 PDGFCQ9NRA1 345 aa17.21■□□□□ 0.35
SH2D3A-207ENST00000597687 ZMYM6O95789 1325 aa17.21■□□□□ 0.34
SH2D3A-207ENST00000597687 LCTP09848 1927 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 SLC16A2P36021 539 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 TTLL4Q14679 1199 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 ALX1Q15699 326 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 CCDC85BQ15834 202 aaPredicted RBP17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 TMEM67Q5HYA8 995 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 GPATCH4Q5T3I0 446 aaKnown RBP17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 TAPT1Q6NXT6 567 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 BTNL9Q6UXG8 535 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 MORC4Q8TE76 937 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 SLC9A7Q96T83 725 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 IL17RBQ9NRM6 502 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 TANC1Q9C0D5 1861 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 WDR19Q8NEZ3 1342 aa17.2■□□□□ 0.34
SH2D3A-207ENST00000597687 KCNJ6P48051 423 aa17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 PURAQ00577 322 aaKnown RBP17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 NFRKBQ6P4R8 1299 aa17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 IQCA1Q86XH1 822 aa17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 ESR2Q92731 530 aa17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 TTC14Q96N46 770 aa17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 ASB2Q96Q27 587 aa17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 TMEM47Q9BQJ4 181 aa17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 FTOQ9C0B1 505 aaKnown RBP eCLIP17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 TCP11L1Q9NUJ3 509 aa17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 CXXC1Q9P0U4 656 aaPredicted RBP17.19■□□□□ 0.34
SH2D3A-207ENST00000597687 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 NFIBO00712 420 aa17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 DHX16O60231 1041 aaKnown RBP17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 PTPN11Q06124 597 aaPredicted RBP17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 DEFB128Q7Z7B8 93 aa17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 ADAMTS19Q8TE59 1207 aa17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 SCLYQ96I15 445 aa17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 UHRF1Q96T88 793 aaPredicted RBP17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 WNT8AQ9H1J5 351 aa17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 TRMT13Q9NUP7 481 aaKnown RBP17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 UMODL1Q5DID0 1318 aa17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 CCDC171Q6TFL3 1326 aa17.18■□□□□ 0.34
SH2D3A-207ENST00000597687 MYH6P13533 1939 aa17.17■□□□□ 0.34
SH2D3A-207ENST00000597687 SCN10AQ9Y5Y9 1956 aa17.17■□□□□ 0.34
SH2D3A-207ENST00000597687 PDHBP11177 359 aa17.17■□□□□ 0.34
SH2D3A-207ENST00000597687 SLC30A10Q6XR72 485 aa17.17■□□□□ 0.34
SH2D3A-207ENST00000597687 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
SH2D3A-207ENST00000597687 MAF1Q9H063 256 aa17.17■□□□□ 0.34
SH2D3A-207ENST00000597687 BAIAP3O94812 1187 aa17.16■□□□□ 0.34
SH2D3A-207ENST00000597687 TXNP10599 105 aaKnown RBP17.16■□□□□ 0.34
SH2D3A-207ENST00000597687 CYP2C9P11712 490 aa17.16■□□□□ 0.34
SH2D3A-207ENST00000597687 RABGGTBP53611 331 aa17.16■□□□□ 0.34
SH2D3A-207ENST00000597687 RPS6P62753 249 aaKnown RBP17.16■□□□□ 0.34
SH2D3A-207ENST00000597687 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
SH2D3A-207ENST00000597687 USH1GQ495M9 461 aa17.16■□□□□ 0.34
SH2D3A-207ENST00000597687 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
SH2D3A-207ENST00000597687 TTBK2Q6IQ55 1244 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms