RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 NECAB3Q96P71 396 aaPredicted RBP9.81□□□□□ -0.84
TSC2-223ENST00000568566 ZSCAN10Q96SZ4 725 aaPredicted RBP9.81□□□□□ -0.84
TSC2-223ENST00000568566 SLF1Q9BQI6 1058 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 TEX13BQ9BXU2 312 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 NKX2-4Q9H2Z4 354 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 GPCPD1Q9NPB8 672 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 TCP11L1Q9NUJ3 509 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 CXXC1Q9P0U4 656 aaPredicted RBP9.81□□□□□ -0.84
TSC2-223ENST00000568566 MSRAQ9UJ68 235 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 LAMA4Q16363 1823 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 TRANK1O15050 2925 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 TCF20Q9UGU0 1960 aaKnown RBP9.81□□□□□ -0.84
TSC2-223ENST00000568566 ELP1O95163 1332 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 TNKSO95271 1327 aa9.81□□□□□ -0.84
TSC2-223ENST00000568566 FRMPD2Q68DX3 1309 aaPredicted RBP9.81□□□□□ -0.84
TSC2-223ENST00000568566 ARVCFO00192 962 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 IFIT3O14879 490 aaKnown RBP9.8□□□□□ -0.84
TSC2-223ENST00000568566 TTLL1O95922 423 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 RXRAP19793 462 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 CST5P28325 142 aaPredicted RBP9.8□□□□□ -0.84
TSC2-223ENST00000568566 SLC16A2P36021 539 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 CDK7P50613 346 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 RAB30Q15771 203 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 SLFN13Q68D06 897 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 FAM126BQ8IXS8 530 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 MSL3Q8N5Y2 521 aaKnown RBP9.8□□□□□ -0.84
TSC2-223ENST00000568566 PCSK9Q8NBP7 692 aaKnown RBP9.8□□□□□ -0.84
TSC2-223ENST00000568566 NCOA7Q8NI08 942 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 ANKS1AQ92625 1134 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 FAM122AQ96E09 287 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 NEK1Q96PY6 1258 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 KIF2CQ99661 725 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 RNF41Q9H4P4 317 aaPredicted RBP9.8□□□□□ -0.84
TSC2-223ENST00000568566 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.8□□□□□ -0.84
TSC2-223ENST00000568566 BRPF3Q9ULD4 1205 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 YBX2Q9Y2T7 364 aaKnown RBP9.8□□□□□ -0.84
TSC2-223ENST00000568566 RIPK3Q9Y572 518 aa9.8□□□□□ -0.84
TSC2-223ENST00000568566 DNAJC25-GNG10A0A024R161 153 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 SH2B2O14492 632 aaPredicted RBP9.79□□□□□ -0.84
TSC2-223ENST00000568566 TLR3O15455 904 aaKnown RBP9.79□□□□□ -0.84
TSC2-223ENST00000568566 REC8O95072 547 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 RABGGTBP53611 331 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 BEX3Q00994 111 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 ACVR2BQ13705 512 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 CCDC144BQ3MJ40 725 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 TSGA10IPQ3SY00 556 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 GNASQ5JWF2 1037 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 MAMDC4Q6UXC1 1216 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 ARMCX2Q7L311 632 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 CPXCR1Q8N123 301 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 STAG2Q8N3U4 1231 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 HERVK_113Q902F9 699 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 FGD4Q96M96 766 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 UPF3BQ9BZI7 483 aaKnown RBP9.79□□□□□ -0.84
TSC2-223ENST00000568566 KRT23Q9C075 422 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 UBA5Q9GZZ9 404 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 UPF3AQ9H1J1 476 aaKnown RBP9.79□□□□□ -0.84
TSC2-223ENST00000568566 SLC28A3Q9HAS3 691 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 LY9Q9HBG7 655 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 SPC25Q9HBM1 224 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 IL23AQ9NPF7 189 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 PRRC2BQ5JSZ5 2229 aaKnown RBP9.79□□□□□ -0.84
TSC2-223ENST00000568566 UMODL1Q5DID0 1318 aa9.79□□□□□ -0.84
TSC2-223ENST00000568566 PIEZO1Q92508 2521 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 TMEM232C9JQI7 657 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 TOP1P11387 765 aaKnown RBP9.78□□□□□ -0.84
TSC2-223ENST00000568566 GJA9P57773 515 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 TFF2Q03403 129 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 TMEM67Q5HYA8 995 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 NOL8Q76FK4 1167 aaKnown RBP9.78□□□□□ -0.84
TSC2-223ENST00000568566 OTOP2Q7RTS6 562 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 ZNF467Q7Z7K2 595 aaPredicted RBP9.78□□□□□ -0.84
TSC2-223ENST00000568566 RALYLQ86SE5 291 aaKnown RBP9.78□□□□□ -0.84
TSC2-223ENST00000568566 CCDC144CPQ8IYA2 1237 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 CMTR1Q8N1G2 835 aaKnown RBP9.78□□□□□ -0.84
TSC2-223ENST00000568566 MTIF3Q9H2K0 278 aaKnown RBP9.78□□□□□ -0.84
TSC2-223ENST00000568566 HIPK3Q9H422 1215 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 ZNF287Q9HBT7 754 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 RAVER2Q9HCJ3 691 aaKnown RBP9.78□□□□□ -0.84
TSC2-223ENST00000568566 HOMER2Q9NSB8 354 aa9.78□□□□□ -0.84
TSC2-223ENST00000568566 CTDP1Q9Y5B0 961 aaPredicted RBP9.78□□□□□ -0.84
TSC2-223ENST00000568566 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.77□□□□□ -0.85
TSC2-223ENST00000568566 CTAGE5O15320 804 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 PPFIA3O75145 1194 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 CD4P01730 458 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 FGBP02675 491 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 PDHBP11177 359 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 PCP11498 1178 aaKnown RBP9.77□□□□□ -0.85
TSC2-223ENST00000568566 MYOGP15173 224 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 PTGS1P23219 599 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 KCNQ1P51787 676 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 CCL23P55773 120 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 APOBRQ0VD83 1088 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 PPP2R2DQ66LE6 453 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 CXCL17Q6UXB2 119 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 Q6ZUG5 572 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 DGKHQ86XP1 1220 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 ANKRD35Q8N283 1001 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 GMCL1P1Q8NEA9 526 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms