RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 SLC51AQ86UW1 340 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 DNAAF5Q86Y56 855 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 EHBP1Q8NDI1 1231 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 COL1A1P02452 1464 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-214ENST00000535493 SHOX2O60902 331 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-214ENST00000535493 CALM1P0DP23 149 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 CALM2P0DP24 149 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 CALM3P0DP25 149 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 GUCY1A3Q02108 690 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 ARID5AQ03989 594 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 CADPS2Q86UW7 1296 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 MTMR8Q96EF0 704 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 ZIM3Q96PE6 472 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 MTA3Q9BTC8 594 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 DCP1AQ9NPI6 582 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-214ENST00000535493 NLRC4Q9NPP4 1024 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 KBTBD4Q9NVX7 518 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 NFU1Q9UMS0 254 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 PCDHA6Q9UN73 950 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 PCDHA8Q9Y5H6 950 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 A0A087WUV0 522 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-214ENST00000535493 LRRC53A6NM62 1247 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 DDAH1O94760 285 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 GLI1P08151 1106 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 TFAP4Q01664 338 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 LRRC41Q15345 812 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 HAUS3Q68CZ6 603 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 BICDL1Q6ZP65 573 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 SLC44A5Q8NCS7 719 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 TRIM9Q9C026 710 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 SEMA6BQ9H3T3 888 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 VAT1LQ9HCJ6 419 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 MCM9Q9NXL9 1143 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 COL4A1P02462 1669 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 LOC102724159A0A0B4J2E5 919 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 EIF3HO15372 352 aaKnown RBP eCLIP14.9□□□□□ -0.02
HDAC4-214ENST00000535493 CYTH3O43739 400 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 CCNT1O60563 726 aaKnown RBP14.9□□□□□ -0.02
HDAC4-214ENST00000535493 TACC1O75410 805 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 IBSPP21815 317 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-214ENST00000535493 TRAPPC10P48553 1259 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 MECOMQ03112 1051 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 PPFIA1Q13136 1202 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 PWP2Q15269 919 aaKnown RBP14.9□□□□□ -0.02
HDAC4-214ENST00000535493 ARL6IP4Q66PJ3 421 aaKnown RBP14.9□□□□□ -0.02
HDAC4-214ENST00000535493 KIAA0895Q8NCT3 520 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 PURBQ96QR8 312 aaKnown RBP14.9□□□□□ -0.02
HDAC4-214ENST00000535493 RUFY1Q96T51 708 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 SH2D4AQ9H788 454 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 PCDHA4Q9UN74 947 aa14.9□□□□□ -0.02
HDAC4-214ENST00000535493 MYO1FO00160 1098 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 NDUFAB1O14561 156 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 CCDC70Q6NSX1 233 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 CABP7Q86V35 215 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 CCDC170Q8IYT3 715 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 PNMA1Q8ND90 353 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 ACSBG1Q96GR2 724 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 RPGRIP1Q96KN7 1286 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 CENPHQ9H3R5 247 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 IL17RBQ9NRM6 502 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 STX8Q9UNK0 236 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 FTCDO95954 541 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 CCNE1P24864 410 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 SLC1A4P43007 532 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 SEC24CP53992 1094 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 KCNQ4P56696 695 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 TRIM58Q8NG06 486 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 FAM84BQ96KN1 310 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-214ENST00000535493 STIM2Q9P246 746 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 TIAM2Q8IVF5 1701 aa14.89□□□□□ -0.03
HDAC4-214ENST00000535493 ANO9A1A5B4 782 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 USO1O60763 962 aaKnown RBP14.88□□□□□ -0.03
HDAC4-214ENST00000535493 MAGEA1P43355 309 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 GUCY2DQ02846 1103 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 C8orf74Q6P047 294 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 CCDC43Q96MW1 224 aaKnown RBP14.88□□□□□ -0.03
HDAC4-214ENST00000535493 TANGO6Q9C0B7 1094 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 BTG4Q9NY30 223 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 SHTN1A0MZ66 631 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 GUCY2CP25092 1073 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 MNAT1P51948 309 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 NNTQ13423 1086 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 TDRD12Q587J7 1177 aaKnown RBP14.88□□□□□ -0.03
HDAC4-214ENST00000535493 GJA10Q969M2 543 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 TLR10Q9BXR5 811 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 GOLPH3Q9H4A6 298 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 EPB41L5Q9HCM4 733 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC4-214ENST00000535493 MYH3P11055 1940 aa14.88□□□□□ -0.03
HDAC4-214ENST00000535493 KCNB1Q14721 858 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 KCNV1Q6PIU1 500 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 AMOTL1Q8IY63 956 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 MMGT1Q8N4V1 131 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 NSUN4Q96CB9 384 aaKnown RBP14.87□□□□□ -0.03
HDAC4-214ENST00000535493 BRIP1Q9BX63 1249 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 PLAGL2Q9UPG8 496 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 CAPN7Q9Y6W3 813 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 BACH1O14867 736 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 HSF2BPO75031 334 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 HNRNPH1P31943 449 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms