RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 FAM160A1Q05DH4 1040 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 PPIDQ08752 370 aaKnown RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 SNX1Q13596 522 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 CUL3Q13618 768 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 SEPT2Q15019 361 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 PLCB4Q15147 1175 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 PTPROQ16827 1216 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 DUSP27Q5VZP5 1158 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 THOC7Q6I9Y2 204 aaKnown RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 PHLDB3Q6NSJ2 640 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 OLFML1Q6UWY5 402 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 NEK10Q6ZWH5 1172 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 ATCAYQ86WG3 371 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 SLC7A5P1Q8MH63 180 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 LRRC43Q8N309 656 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 MSANTD4Q8NCY6 345 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 SUN5Q8TC36 379 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 ZFPM2Q8WW38 1151 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 USP6NLQ92738 828 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 ZKSCAN4Q969J2 545 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 GCC1Q96CN9 775 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 ZMAT2Q96NC0 199 aaKnown RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 NSUN5Q96P11 429 aaKnown RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 NEK1Q96PY6 1258 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 CGREF1Q99674 301 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 GORASP1Q9BQQ3 440 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 JPH2Q9BR39 696 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 BRINP2Q9C0B6 783 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 ZHX3Q9H4I2 956 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 AS3MTQ9HBK9 375 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 KCND1Q9NSA2 647 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 TLR7Q9NYK1 1049 aaKnown RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 ZNF148Q9UQR1 794 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 PCDHGC5Q9Y5F6 944 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 SPO11Q9Y5K1 396 aa5.83□□□□□ -1.48
SNHG1-201ENST00000535076 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 SCAF11Q99590 1463 aaKnown RBP5.83□□□□□ -1.48
SNHG1-201ENST00000535076 FHAD1B1AJZ9 1412 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 CNTLNQ9NXG0 1405 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 ABCA5Q8WWZ7 1642 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 SART1O43290 800 aaKnown RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 ZEB2O60315 1214 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 PTCD1O75127 700 aaKnown RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 RNF8O76064 485 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 FOSP01100 380 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 RPN1P04843 607 aaKnown RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 CCDC166P0CW27 439 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 EZRP15311 586 aaKnown RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 SELPP16109 830 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 LMNB1P20700 586 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 SLC8A1P32418 973 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 ZAP70P43403 619 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 TNNI2P48788 182 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 CLNS1AP54105 237 aaKnown RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 ZC3H6P61129 1189 aaKnown RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 TUBA4AP68366 448 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 TUBA3CQ13748 450 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 MAP7Q14244 749 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 RASA2Q15283 850 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 NFE2L2Q16236 605 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 ZSCAN23Q3MJ62 389 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 FBXO38Q6PIJ6 1188 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 CPLX2Q6PUV4 134 aaKnown RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 SHISA2Q6UWI4 295 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 ADAMTSL4Q6UY14 1074 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 TTLL7Q6ZT98 887 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 NT5DC4Q86YG4 428 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 RELL1Q8IUW5 271 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 DMRTC2Q8IXT2 367 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 CEP57L1Q8IYX8 460 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 ZBTB8BQ8NAP8 495 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 GPR152Q8TDT2 470 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 NUP133Q8WUM0 1156 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 ATRIPQ8WXE1 791 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 JARID2Q92833 1246 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 EPSTI1Q96J88 318 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 C11orf16Q9NQ32 467 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 UBAP1Q9NZ09 502 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 ADAM21Q9UKJ8 722 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 TMCO1Q9UM00 188 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 TMA7Q9Y2S6 64 aaKnown RBP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 DAAM1Q9Y4D1 1078 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.82□□□□□ -1.48
SNHG1-201ENST00000535076 MRFAP1Q9Y605 127 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 SOGA1O94964 1423 aa5.82□□□□□ -1.48
SNHG1-201ENST00000535076 TMEM238LA0A1B0GVL6 79 aa5.81□□□□□ -1.48
SNHG1-201ENST00000535076 TTC34A8MYJ7 566 aa5.81□□□□□ -1.48
SNHG1-201ENST00000535076 WDR46O15213 610 aaKnown RBP5.81□□□□□ -1.48
SNHG1-201ENST00000535076 BIRC5O15392 142 aa5.81□□□□□ -1.48
SNHG1-201ENST00000535076 DIAPH1O60610 1272 aaKnown RBP5.81□□□□□ -1.48
SNHG1-201ENST00000535076 RGS9O75916 674 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-201ENST00000535076 FSBPO95073 299 aa5.81□□□□□ -1.48
SNHG1-201ENST00000535076 FGFR1OPO95684 399 aaKnown RBP5.81□□□□□ -1.48
SNHG1-201ENST00000535076 FGAP02671 866 aa5.81□□□□□ -1.48
SNHG1-201ENST00000535076 HSPA1AP0DMV8 641 aaKnown RBP5.81□□□□□ -1.48
SNHG1-201ENST00000535076 HSPA1BP0DMV9 641 aaKnown RBP5.81□□□□□ -1.48
SNHG1-201ENST00000535076 HOXD8P13378 290 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-201ENST00000535076 TSPAN7P41732 249 aa5.81□□□□□ -1.48
SNHG1-201ENST00000535076 PEX5P50542 639 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms