RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, humanhuman

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-208ENST00000497382 TRIM58Q8NG06 486 aa10.64□□□□□ -0.71
VIT-208ENST00000497382 PGBD4Q96DM1 585 aa10.64□□□□□ -0.71
VIT-208ENST00000497382 NR1H4Q96RI1 486 aaPredicted RBP10.64□□□□□ -0.71
VIT-208ENST00000497382 APBA2Q99767 749 aa10.64□□□□□ -0.71
VIT-208ENST00000497382 VCPKMTQ9H867 229 aa10.64□□□□□ -0.71
VIT-208ENST00000497382 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
VIT-208ENST00000497382 CPDO75976 1380 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 KIAA0232Q92628 1395 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 KCNJ13O60928 360 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 PENKP01210 267 aaPredicted RBP10.63□□□□□ -0.71
VIT-208ENST00000497382 LIG3P49916 1009 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 TTC39AQ5SRH9 613 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 TMCO3Q6UWJ1 677 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 BEND5Q7L4P6 421 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 RASSF8Q8NHQ8 419 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 TSC22D3Q99576 134 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 UQCC2Q9BRT2 126 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 UPF3BQ9BZI7 483 aaKnown RBP10.63□□□□□ -0.71
VIT-208ENST00000497382 PARVGQ9HBI0 331 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 TRIM17Q9Y577 477 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 AATKQ6ZMQ8 1374 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 B4DLN1 442 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 TSPAN1O60635 241 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 PTGER2P43116 358 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 AP2B1P63010 937 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 DGLUCYQ7Z3D6 616 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 CCDC50Q8IVM0 306 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 ARHGEF2Q92974 986 aaKnown RBP10.63□□□□□ -0.71
VIT-208ENST00000497382 CLMNQ96JQ2 1002 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 HESX1Q9UBX0 185 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 PFDN2Q9UHV9 154 aa10.63□□□□□ -0.71
VIT-208ENST00000497382 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 AKR1B15C9JRZ8 316 aaPredicted RBP10.62□□□□□ -0.71
VIT-208ENST00000497382 TEX28O15482 410 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 PRMT3O60678 531 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 SMTNP53814 917 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 SP140Q13342 867 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 COG2Q14746 738 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 PROSER3Q2NL68 480 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 ZC3H12BQ5HYM0 836 aaKnown RBP10.62□□□□□ -0.71
VIT-208ENST00000497382 FOXR1Q6PIV2 292 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 CKAP2LQ8IYA6 745 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 TRIML2Q8N7C3 387 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 HOOK2Q96ED9 719 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 CCT7Q99832 543 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 GALNT8Q9NY28 637 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 RPAP1Q9BWH6 1393 aaPredicted RBP10.62□□□□□ -0.71
VIT-208ENST00000497382 LIN7AO14910 233 aaPredicted RBP10.62□□□□□ -0.71
VIT-208ENST00000497382 STAMBPO95630 424 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 MYL3P08590 195 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 IKQ13123 557 aaPredicted RBP10.62□□□□□ -0.71
VIT-208ENST00000497382 LRRC41Q15345 812 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 ELF2Q15723 593 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 CCDC38Q502W7 563 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 TMEM132EQ6IEE7 984 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 CCDC110Q8TBZ0 833 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 FNBP1Q96RU3 617 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 SYT17Q9BSW7 474 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 PCDHGB3Q9Y5G1 929 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 CCDC7Q96M83 1385 aa10.62□□□□□ -0.71
VIT-208ENST00000497382 LDHBP07195 334 aaKnown RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 CLCN6P51797 869 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 NMIQ13287 307 aaPredicted RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 BBS9Q3SYG4 887 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 BEND6Q5SZJ8 279 aaPredicted RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 NXNQ6DKJ4 435 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 GDAP1Q8TB36 358 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 TRPC4APQ8TEL6 797 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 PBXIP1Q96AQ6 731 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 GPR101Q96P66 508 aaPredicted RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 EIF2AQ9BY44 585 aaKnown RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 VRTNQ9H8Y1 702 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 TYW1Q9NV66 732 aaKnown RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 KIF7Q2M1P5 1343 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 PPP1R12BO60237 982 aaPredicted RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 KPNA6O60684 536 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 TMCC1O94876 653 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 KRT10P13645 584 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 ATP5DP30049 168 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 TUBA3CQ13748 450 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 ARHGEF18Q6ZSZ5 1173 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 CATSPER4Q7RTX7 472 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 APLFQ8IW19 511 aaPredicted RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 EPS8L3Q8TE67 593 aaKnown RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 SPATA17Q96L03 361 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 RBM14Q96PK6 669 aaKnown RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 TCF12Q99081 682 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 MTFR1LQ9H019 292 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 NSRP1Q9H0G5 558 aaKnown RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 GPR108Q9NPR9 543 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 FKBP14Q9NWM8 211 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 WNK3Q9BYP7 1800 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 ANKRD65E5RJM6 399 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 ITGA7Q13683 1181 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 CRY1Q16526 586 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 TNNI3KQ59H18 835 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 ZNF746Q6NUN9 644 aaPredicted RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 RNF10Q8N5U6 811 aaKnown RBP10.61□□□□□ -0.71
VIT-208ENST00000497382 GALNT6Q8NCL4 622 aa10.61□□□□□ -0.71
VIT-208ENST00000497382 CACTINQ8WUQ7 758 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms