RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 ZNF467Q7Z7K2 595 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-210ENST00000490081 MMP19Q99542 508 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 NUDT12Q9BQG2 462 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 PSTPIP2Q9H939 334 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 RIC8AQ9NPQ8 531 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 SLC5A4Q9NY91 659 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 CYP39A1Q9NYL5 469 aa14.36□□□□□ -0.11
HDAC1-210ENST00000490081 PLXNA1Q9UIW2 1896 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 hCG_1642624A0A1W2PR95 340 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 NFIBO00712 420 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 MEIS2O14770 477 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 JAK2O60674 1132 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 CALML3P27482 149 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 NAPAP54920 295 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 MAP2K5Q13163 448 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 PKN2Q16513 984 aaKnown RBP14.35□□□□□ -0.11
HDAC1-210ENST00000490081 ZNF792Q3KQV3 632 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 RNF207Q6ZRF8 634 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 TRMT44Q8IYL2 757 aaKnown RBP14.35□□□□□ -0.11
HDAC1-210ENST00000490081 ANKRD35Q8N283 1001 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
HDAC1-210ENST00000490081 FAM133AQ8N9E0 248 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 DAGLBQ8NCG7 672 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 DNERQ8NFT8 737 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 CD99L2Q8TCZ2 262 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 BICD2Q8TD16 824 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 GPKOWQ92917 476 aaPredicted RBP eCLIP14.35□□□□□ -0.112e-12■□□□□ 9.6
HDAC1-210ENST00000490081 ALG1Q9BT22 464 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 C6orf50Q9HD87 102 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 SRRDQ9UH36 339 aa14.35□□□□□ -0.11
HDAC1-210ENST00000490081 SMCO2A6NFE2 343 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 GCOM1H8Y6P7 765 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-210ENST00000490081 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-210ENST00000490081 POLR2MP0CAP2 368 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 ADORA2AP29274 412 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 CLK2P49760 499 aaKnown RBP14.34□□□□□ -0.11
HDAC1-210ENST00000490081 RPS6P62753 249 aaKnown RBP14.34□□□□□ -0.11
HDAC1-210ENST00000490081 CAP1Q01518 475 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 CUL5Q93034 780 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 DDX11Q96FC9 970 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 PHF20Q9BVI0 1012 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 ARHGAP39Q9C0H5 1083 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 HOMER2Q9NSB8 354 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 SMC3Q9UQE7 1217 aa14.34□□□□□ -0.11
HDAC1-210ENST00000490081 M0R2N6 131 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 COBLO75128 1261 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 PDCP20941 246 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 RGS2P41220 211 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 BAATQ14032 418 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-210ENST00000490081 NPY5RQ15761 445 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 OLFML2BQ68BL8 750 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 MAMDC4Q6UXC1 1216 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 OTOP1Q7RTM1 612 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 FAM184AQ8NB25 1140 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 FBXO18Q8NFZ0 1043 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 SYTL5Q8TDW5 730 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-210ENST00000490081 MORC4Q8TE76 937 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 PXYLP1Q8TE99 480 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 TBC1D5Q92609 795 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 SHISA4Q96DD7 197 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 IWS1Q96ST2 819 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 CWC22Q9HCG8 908 aaKnown RBP14.33□□□□□ -0.12
HDAC1-210ENST00000490081 ADD3Q9UEY8 706 aaKnown RBP14.33□□□□□ -0.12
HDAC1-210ENST00000490081 LCTP09848 1927 aa14.33□□□□□ -0.12
HDAC1-210ENST00000490081 ZSWIM8A7E2V4 1837 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 B4DLN1 442 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 CFBP00751 764 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 GJB2P29033 226 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 SLC4A3P48751 1232 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 FLT3LGP49771 235 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 ADCY7P51828 1080 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 SOX10P56693 466 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 AP3B2Q13367 1082 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 WDR78Q5VTH9 848 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 NSMFQ6X4W1 530 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 DPP9Q86TI2 863 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 APBA2Q99767 749 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 VPS54Q9P1Q0 977 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 PCDHA4Q9UN74 947 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 FRMPD4Q14CM0 1322 aa14.32□□□□□ -0.12
HDAC1-210ENST00000490081 PPFIA3O75145 1194 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 NLRP5P59047 1200 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 TRIM29Q14134 588 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 XRRA1Q6P2D8 792 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 NSUN6Q8TEA1 469 aaKnown RBP14.31□□□□□ -0.12
HDAC1-210ENST00000490081 C8orf76Q96K31 380 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 FGD4Q96M96 766 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 AIFM3Q96NN9 605 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 TSHZ2Q9NRE2 1034 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 NRBP1Q9UHY1 535 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 PTPN22Q9Y2R2 807 aa14.31□□□□□ -0.12
HDAC1-210ENST00000490081 SOWAHBA6NEL2 793 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 ASB14A6NK59 587 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 MMP1P03956 469 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 TAL1P17542 331 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-210ENST00000490081 EDNRBP24530 442 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 PRKCZQ05513 592 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 KRT40Q6A162 431 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 486.8 ms