RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 TRIM32Q13049 653 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 MAP2K5Q13163 448 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 STK3Q13188 491 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 PFKFB3Q16875 520 aaPredicted RBP10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 MUM1L1Q5H9M0 696 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 PPP1R18Q6NYC8 613 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 NCAPG2Q86XI2 1143 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 HOMER1Q86YM7 354 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 FAM177A1Q8N128 213 aaPredicted RBP10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 SAMD3Q8N6K7 520 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 TRIB2Q92519 343 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 DPF3Q92784 378 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 SNX21Q969T3 373 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 TRERF1Q96PN7 1200 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 VAT1LQ9HCJ6 419 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 PAK6Q9NQU5 681 aaPredicted RBP10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 SEC63Q9UGP8 760 aaKnown RBP10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 PFASO15067 1338 aa10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 KIAA0100Q14667 2235 aaKnown RBP10.77□□□□□ -0.69
SHROOM3-207ENST00000485780 NFIBO00712 420 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 CPLX1O14810 134 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 CDKL5O76039 1030 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 FCER1AP12319 257 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 ALAS1P13196 640 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 SCG2P13521 617 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 TAL1P17542 331 aaPredicted RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 HSD17B4P51659 736 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 MFSD14CQ5VZR4 134 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 WWC2Q6AWC2 1192 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 CPLX2Q6PUV4 134 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 CCDC82Q8N4S0 544 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 NSUN7Q8NE18 718 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 SMARCC2Q8TAQ2 1214 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 PHKBQ93100 1093 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 TMX3Q96JJ7 454 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 LLPHQ9BRT6 129 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 A1CFQ9NQ94 594 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 BARHL2Q9NY43 387 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 MAP3K20Q9NYL2 800 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 DIS3Q9Y2L1 958 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 MRPL11Q9Y3B7 192 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 PCDHA1Q9Y5I3 950 aa10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 V9GY48 417 aaPredicted RBP10.76□□□□□ -0.69
SHROOM3-207ENST00000485780 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 ESYT2A0FGR8 921 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 COBLO75128 1261 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 DEXIO95424 95 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 FDPSP14324 419 aaKnown RBP10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 ADORA2AP29274 412 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 CUL4AQ13619 759 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 CCL14Q16627 93 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 USH1GQ495M9 461 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 DPP9Q86TI2 863 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 TRIM22Q8IYM9 498 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 NECAB1Q8N987 351 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 FAM133AQ8N9E0 248 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 FGD4Q96M96 766 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 MMP19Q99542 508 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 SH3GLB2Q9NR46 395 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 CYP39A1Q9NYL5 469 aa10.75□□□□□ -0.69
SHROOM3-207ENST00000485780 KIAA1217Q5T5P2 1943 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 LOC102724159A0A0B4J2E5 919 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 hCG_1642624A0A1W2PR95 340 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 PTPDC1A2A3K4 754 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 STXBP3O00186 592 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 PIK3CDO00329 1044 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 CACNB2Q08289 660 aaPredicted RBP10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 SSRP1Q08945 709 aaKnown RBP10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 KCTD2Q14681 263 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 PWP2Q15269 919 aaKnown RBP10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 ZNF792Q3KQV3 632 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 MAP3K21Q5TCX8 1036 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 NECAB2Q7Z6G3 386 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 MCF2L2Q86YR7 1114 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 CCDC83Q8IWF9 413 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 ANKLE1Q8NAG6 615 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 GPKOWQ92917 476 aaPredicted RBP eCLIP10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 SLC26A6Q9BXS9 759 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 CRISPLD2Q9H0B8 497 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 HOMER2Q9NSB8 354 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 SLC5A4Q9NY91 659 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 ASTN1O14525 1302 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 FRMPD4Q14CM0 1322 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 FRMPD3Q5JV73 1810 aa10.74□□□□□ -0.69
SHROOM3-207ENST00000485780 CNGA1P29973 690 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 RPS6P62753 249 aaKnown RBP10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 HMGN5P82970 282 aaKnown RBP10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 OLFML2BQ68BL8 750 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 MAMDC4Q6UXC1 1216 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 SLC30A10Q6XR72 485 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 HEATR3Q7Z4Q2 680 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 UBE2Q1Q7Z7E8 422 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 ANKRD35Q8N283 1001 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 MSL3Q8N5Y2 521 aaKnown RBP10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 NPLOC4Q8TAT6 608 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 MORC4Q8TE76 937 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 PIBF1Q8WXW3 757 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms