RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 TYW1BQ6NUM6 668 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 PLEKHH3Q7Z736 793 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 FBXO11Q86XK2 927 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 TDHQ8IZJ6 230 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 GTF3C6Q969F1 213 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 RRP36Q96EU6 259 aaKnown RBP14.16□□□□□ -0.14
TRA2B-213ENST00000485530 TMX3Q96JJ7 454 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRA2B-213ENST00000485530 MROH8Q9H579 483 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 CTDP1Q9Y5B0 961 aaPredicted RBP14.16□□□□□ -0.14
TRA2B-213ENST00000485530 ADAMTS3O15072 1205 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 ST18O60284 1047 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 COBLO75128 1261 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 SYN1P17600 705 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 MAPK4P31152 587 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 CCNA1P78396 465 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRA2B-213ENST00000485530 ANKLE1Q8NAG6 615 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 PURBQ96QR8 312 aaKnown RBP14.15□□□□□ -0.14
TRA2B-213ENST00000485530 AMNQ9BXJ7 453 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 PCDHA1Q9Y5I3 950 aa14.15□□□□□ -0.14
TRA2B-213ENST00000485530 JAK2O60674 1132 aa14.14□□□□□ -0.15
TRA2B-213ENST00000485530 WDR78Q5VTH9 848 aa14.14□□□□□ -0.15
TRA2B-213ENST00000485530 WWC2Q6AWC2 1192 aa14.14□□□□□ -0.15
TRA2B-213ENST00000485530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRA2B-213ENST00000485530 CCDC83Q8IWF9 413 aa14.14□□□□□ -0.15
TRA2B-213ENST00000485530 CHST13Q8NET6 341 aa14.14□□□□□ -0.15
TRA2B-213ENST00000485530 GPKOWQ92917 476 aaPredicted RBP eCLIP14.14□□□□□ -0.15
TRA2B-213ENST00000485530 ZSCAN31Q96LW9 406 aaPredicted RBP14.14□□□□□ -0.15
TRA2B-213ENST00000485530 SLC26A6Q9BXS9 759 aa14.14□□□□□ -0.15
TRA2B-213ENST00000485530 EYSQ5T1H1 3165 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 DNAJC25-GNG10A0A024R161 153 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 SLC15A5A6NIM6 579 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 STRNO43815 780 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 PGK2P07205 417 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 GRB14Q14449 540 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 PFKFB3Q16875 520 aaPredicted RBP14.13□□□□□ -0.15
TRA2B-213ENST00000485530 TKFCQ3LXA3 575 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 NSUN7Q8NE18 718 aaKnown RBP14.13□□□□□ -0.15
TRA2B-213ENST00000485530 IL27Q8NEV9 243 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 NPLOC4Q8TAT6 608 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 FGD4Q96M96 766 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 A1CFQ9NQ94 594 aaKnown RBP14.13□□□□□ -0.15
TRA2B-213ENST00000485530 GJB4Q9NTQ9 266 aa14.13□□□□□ -0.15
TRA2B-213ENST00000485530 STXBP3O00186 592 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 IGHA2P01877 340 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 FCER1AP12319 257 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 ADORA2AP29274 412 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 CNTN2Q02246 1040 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 SSRP1Q08945 709 aaKnown RBP14.12□□□□□ -0.15
TRA2B-213ENST00000485530 BAATQ14032 418 aaPredicted RBP14.12□□□□□ -0.15
TRA2B-213ENST00000485530 CCAR1Q8IX12 1150 aaKnown RBP14.12□□□□□ -0.15
TRA2B-213ENST00000485530 ABRAQ8N0Z2 381 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 SMARCC2Q8TAQ2 1214 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 SNX21Q969T3 373 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 RNF26Q9BY78 433 aaPredicted RBP14.12□□□□□ -0.15
TRA2B-213ENST00000485530 ACAD9Q9H845 621 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 SH2B1Q9NRF2 756 aaPredicted RBP14.12□□□□□ -0.15
TRA2B-213ENST00000485530 CYP39A1Q9NYL5 469 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 COL20A1Q9P218 1284 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 DDX49Q9Y6V7 483 aaKnown RBP14.12□□□□□ -0.15
TRA2B-213ENST00000485530 ASTN1O14525 1302 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 ABCB11O95342 1321 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 RPTORQ8N122 1335 aa14.12□□□□□ -0.15
TRA2B-213ENST00000485530 SOWAHBA6NEL2 793 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 CPLX1O14810 134 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 HMGCRP04035 888 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 SCG2P13521 617 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 CYP2B6P20813 491 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 MCM2P49736 904 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 MAP2K5Q13163 448 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 CCL14Q16627 93 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 ZNF792Q3KQV3 632 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 NSMFQ6X4W1 530 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 SLC30A10Q6XR72 485 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 HEATR3Q7Z4Q2 680 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 DOCK3Q8IZD9 2030 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 RGS22Q8NE09 1264 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 DDX11Q96FC9 970 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 MMP19Q99542 508 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 UBE2OQ9C0C9 1292 aaKnown RBP14.11□□□□□ -0.15
TRA2B-213ENST00000485530 C11orf49Q9H6J7 331 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 BARHL2Q9NY43 387 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 FLRT1Q9NZU1 646 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 SEC63Q9UGP8 760 aaKnown RBP14.11□□□□□ -0.15
TRA2B-213ENST00000485530 FBXO40Q9UH90 709 aa14.11□□□□□ -0.15
TRA2B-213ENST00000485530 MRPL11Q9Y3B7 192 aaKnown RBP14.11□□□□□ -0.15
TRA2B-213ENST00000485530 LAMA2P24043 3122 aaKnown RBP14.11□□□□□ -0.15
TRA2B-213ENST00000485530 PTPDC1A2A3K4 754 aa14.1□□□□□ -0.15
TRA2B-213ENST00000485530 MEIS2O14770 477 aa14.1□□□□□ -0.15
TRA2B-213ENST00000485530 HOXC6P09630 235 aa14.1□□□□□ -0.15
TRA2B-213ENST00000485530 COPB2P35606 906 aa14.1□□□□□ -0.15
TRA2B-213ENST00000485530 RPS6P62753 249 aaKnown RBP14.1□□□□□ -0.15
TRA2B-213ENST00000485530 GHRHRQ02643 423 aa14.1□□□□□ -0.15
TRA2B-213ENST00000485530 TRIM32Q13049 653 aa14.1□□□□□ -0.15
TRA2B-213ENST00000485530 CUL4AQ13619 759 aa14.1□□□□□ -0.15
TRA2B-213ENST00000485530 ANKRD35Q8N283 1001 aa14.1□□□□□ -0.15
TRA2B-213ENST00000485530 FAM133AQ8N9E0 248 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms