RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 CCAR1Q8IX12 1150 aaKnown RBP7.37□□□□□ -1.23
HERC4-210ENST00000480158 PURBQ96QR8 312 aaKnown RBP7.37□□□□□ -1.23
HERC4-210ENST00000480158 MOV10L1Q9BXT6 1211 aaKnown RBP7.37□□□□□ -1.23
HERC4-210ENST00000480158 SPATC1LQ9H0A9 340 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 C6orf50Q9HD87 102 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 RNF146Q9NTX7 359 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 CHMP5Q9NZZ3 219 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 HSPA6P17066 643 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 ERCC3P19447 782 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 CALML3P27482 149 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 KRT2P35908 639 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 TM4SF4P48230 202 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 ERVK-9P63128 1117 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 ERVK-24P63145 666 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 UBXN2AP68543 259 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 CEBPZQ03701 1054 aaKnown RBP7.37□□□□□ -1.23
HERC4-210ENST00000480158 MFSD10Q14728 455 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 NPY5RQ15761 445 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 EARS2Q5JPH6 523 aaKnown RBP7.37□□□□□ -1.23
HERC4-210ENST00000480158 PIK3AP1Q6ZUJ8 805 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 BLIDQ8IZY5 108 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 GPRC5AQ8NFJ5 357 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 CCDC148Q8NFR7 591 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 CCDC12Q8WUD4 166 aaPredicted RBP7.37□□□□□ -1.23
HERC4-210ENST00000480158 CUL5Q93034 780 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 ZMYND12Q9H0C1 365 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 PORCNQ9H237 461 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 EFCC1Q9HA90 598 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 SH3GLB2Q9NR46 395 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 PCDHA4Q9UN74 947 aa7.37□□□□□ -1.23
HERC4-210ENST00000480158 LOC285556D6RIA3 1793 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 MYPNQ86TC9 1320 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 BRD1O95696 1058 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 GNA11P29992 359 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 MRPL12P52815 198 aaKnown RBP7.36□□□□□ -1.23
HERC4-210ENST00000480158 NUCB2P80303 420 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 REXO1Q8N1G1 1221 aaKnown RBP7.36□□□□□ -1.23
HERC4-210ENST00000480158 CLEC4DQ8WXI8 215 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 BRMS1Q9HCU9 246 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 TSKSQ9UJT2 592 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 MRPL11Q9Y3B7 192 aaKnown RBP7.36□□□□□ -1.23
HERC4-210ENST00000480158 RABGAP1Q9Y3P9 1069 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 DDX49Q9Y6V7 483 aaKnown RBP7.36□□□□□ -1.23
HERC4-210ENST00000480158 ABCB11O95342 1321 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 MEIS2O14770 477 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 F13A1P00488 732 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 FDX1P10109 184 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 NCLP19338 710 aaKnown RBP7.36□□□□□ -1.23
HERC4-210ENST00000480158 BAATQ14032 418 aaPredicted RBP7.36□□□□□ -1.23
HERC4-210ENST00000480158 SLC30A10Q6XR72 485 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 ANKRD35Q8N283 1001 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 EFCAB3Q8N7B9 438 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 MB21D1Q8N884 522 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 UIMC1Q96RL1 719 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 FTOQ9C0B1 505 aaKnown RBP eCLIP7.36□□□□□ -1.23
HERC4-210ENST00000480158 ZFYVE28Q9HCC9 887 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 RIC8AQ9NPQ8 531 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 TFIP11Q9UBB9 837 aaKnown RBP7.36□□□□□ -1.23
HERC4-210ENST00000480158 PCDHA6Q9UN73 950 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 SLC45A1Q9Y2W3 748 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 PCDHA8Q9Y5H6 950 aa7.36□□□□□ -1.23
HERC4-210ENST00000480158 SMCHD1A6NHR9 2005 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 RLFQ13129 1914 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 CCDC194A0A1B0GVG4 234 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 GCOM1H8Y6P7 765 aaPredicted RBP7.35□□□□□ -1.23
HERC4-210ENST00000480158 hCG_1984214I3L0E3 225 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 TLR2O60603 784 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 PGK2P07205 417 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 POLR2MP0CAP2 368 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 GCLCP48506 637 aaPredicted RBP7.35□□□□□ -1.23
HERC4-210ENST00000480158 OAZ1P54368 228 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 RPS6P62753 249 aaKnown RBP7.35□□□□□ -1.23
HERC4-210ENST00000480158 RESTQ13127 1097 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 INF2Q27J81 1249 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 RNF207Q6ZRF8 634 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 NOSTRINQ8IVI9 506 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 ZNF713Q8N859 430 aaPredicted RBP7.35□□□□□ -1.23
HERC4-210ENST00000480158 TNPO1Q92973 898 aaKnown RBP7.35□□□□□ -1.23
HERC4-210ENST00000480158 ACAD9Q9H845 621 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 ATP2A1O14983 1001 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 DNM1Q05193 864 aaKnown RBP7.35□□□□□ -1.23
HERC4-210ENST00000480158 TRAF1Q13077 416 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 RIOX2Q8IUF8 465 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 BICD2Q8TD16 824 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 KDM4CQ9H3R0 1056 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 GDPD2Q9HCC8 539 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 A1CFQ9NQ94 594 aaKnown RBP7.35□□□□□ -1.23
HERC4-210ENST00000480158 RNF186Q9NXI6 227 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 COL20A1Q9P218 1284 aa7.35□□□□□ -1.23
HERC4-210ENST00000480158 MYH6P13533 1939 aa7.34□□□□□ -1.23
HERC4-210ENST00000480158 COL11A1P12107 1806 aaPredicted RBP7.34□□□□□ -1.23
HERC4-210ENST00000480158 SPDYE3A6NKU9 549 aa7.34□□□□□ -1.23
HERC4-210ENST00000480158 WNT7AO00755 349 aa7.34□□□□□ -1.23
HERC4-210ENST00000480158 CA12O43570 354 aa7.34□□□□□ -1.23
HERC4-210ENST00000480158 U2AF2P26368 475 aaKnown RBP eCLIP7.34□□□□□ -1.233e-6■■■■■ 26.9
HERC4-210ENST00000480158 MAP2K2P36507 400 aa7.34□□□□□ -1.23
HERC4-210ENST00000480158 CCNA1P78396 465 aa7.34□□□□□ -1.23
HERC4-210ENST00000480158 CNTN2Q02246 1040 aa7.34□□□□□ -1.23
HERC4-210ENST00000480158 PPP1R18Q6NYC8 613 aa7.34□□□□□ -1.23
HERC4-210ENST00000480158 MCF2L2Q86YR7 1114 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms