RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 PITPNM2Q9BZ72 1349 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 TRBV23OR9-2A0A075B6M9 112 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 KPNA6O60684 536 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 RAB11FIP3O75154 756 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 JMJD7P0C870 316 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 FOSL1P15407 271 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 GAB4Q2WGN9 574 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 UBE2R2Q712K3 238 aaPredicted RBP7.61□□□□□ -1.19
BRAF-203ENST00000479537 ZDHHC13Q8IUH4 622 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 DDX1Q92499 740 aaKnown RBP7.61□□□□□ -1.19
BRAF-203ENST00000479537 SCLYQ96I15 445 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 ALG1Q9BT22 464 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 PCDHA8Q9Y5H6 950 aa7.61□□□□□ -1.19
BRAF-203ENST00000479537 B4E1Z4 1266 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 MYO1BO43795 1136 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 TBC1D8O95759 1140 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 GPR85P60893 370 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 AOC3Q16853 763 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 CFAP100Q494V2 611 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 IQCEQ6IPM2 695 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 RSPO2Q6UXX9 243 aaPredicted RBP7.6□□□□□ -1.19
BRAF-203ENST00000479537 ZPBP2Q6X784 338 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 RNF180Q86T96 592 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 CPNE8Q86YQ8 564 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 ATL2Q8NHH9 583 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 ASB11Q8WXH4 323 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 CHAMP1Q96JM3 812 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 PTCHD1Q96NR3 888 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 ZFYVE21Q9BQ24 234 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 GPR27Q9NS67 375 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 MCM8Q9UJA3 840 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 ATP8A1Q9Y2Q0 1164 aa7.6□□□□□ -1.19
BRAF-203ENST00000479537 TCRBV16S1A1N1A0A5B0 115 aa7.59□□□□□ -1.19
BRAF-203ENST00000479537 FGF10O15520 208 aaPredicted RBP7.59□□□□□ -1.19
BRAF-203ENST00000479537 LCP1P13796 627 aa7.59□□□□□ -1.19
BRAF-203ENST00000479537 CPEP16870 476 aa7.59□□□□□ -1.19
BRAF-203ENST00000479537 IKZF1Q13422 519 aa7.59□□□□□ -1.19
BRAF-203ENST00000479537 DDX46Q7L014 1031 aaKnown RBP7.59□□□□□ -1.19
BRAF-203ENST00000479537 JAMLQ86YT9 394 aa7.59□□□□□ -1.19
BRAF-203ENST00000479537 CCDC103Q8IW40 242 aa7.59□□□□□ -1.19
BRAF-203ENST00000479537 ZC3H7AQ8IWR0 971 aaKnown RBP7.59□□□□□ -1.19
BRAF-203ENST00000479537 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.59□□□□□ -1.19
BRAF-203ENST00000479537 SRGAP2CP0DJJ0 459 aa7.58□□□□□ -1.2
BRAF-203ENST00000479537 TEKQ02763 1124 aa7.58□□□□□ -1.2
BRAF-203ENST00000479537 PRSS36Q5K4E3 855 aa7.58□□□□□ -1.2
BRAF-203ENST00000479537 PIK3R6Q5UE93 754 aa7.58□□□□□ -1.2
BRAF-203ENST00000479537 PKN3Q6P5Z2 889 aa7.58□□□□□ -1.2
BRAF-203ENST00000479537 CYP2R1Q6VVX0 501 aa7.58□□□□□ -1.2
BRAF-203ENST00000479537 DDX53Q86TM3 631 aaKnown RBP7.58□□□□□ -1.2
BRAF-203ENST00000479537 SLC51AQ86UW1 340 aa7.58□□□□□ -1.2
BRAF-203ENST00000479537 RPUSD2Q8IZ73 545 aaKnown RBP7.58□□□□□ -1.2
BRAF-203ENST00000479537 FAM126AQ9BYI3 521 aaPredicted RBP7.58□□□□□ -1.2
BRAF-203ENST00000479537 BTG4Q9NY30 223 aa7.58□□□□□ -1.2
BRAF-203ENST00000479537 PCDHA2Q9Y5H9 948 aa7.58□□□□□ -1.2
BRAF-203ENST00000479537 TMEM82A0PJX8 343 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 PRR19A6NJB7 356 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 MSCO60682 206 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 TGFB1P01137 390 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 ESR1P03372 595 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 EVA1CP58658 441 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 STRN3Q13033 797 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 PAK1Q13153 545 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 PCBP1Q15365 356 aaKnown RBP eCLIP7.57□□□□□ -1.2
BRAF-203ENST00000479537 CDCA2Q69YH5 1023 aaPredicted RBP7.57□□□□□ -1.2
BRAF-203ENST00000479537 DDX42Q86XP3 938 aaKnown RBP eCLIP7.57□□□□□ -1.2
BRAF-203ENST00000479537 PRPF38AQ8NAV1 312 aaKnown RBP7.57□□□□□ -1.2
BRAF-203ENST00000479537 RCBTB1Q8NDN9 531 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 MMP19Q99542 508 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 HOMER2Q9NSB8 354 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 DDX56Q9NY93 547 aaKnown RBP7.57□□□□□ -1.2
BRAF-203ENST00000479537 NPFFR2Q9Y5X5 522 aa7.57□□□□□ -1.2
BRAF-203ENST00000479537 HOXA10P31260 410 aaPredicted RBP7.56□□□□□ -1.2
BRAF-203ENST00000479537 GRIK1P39086 918 aa7.56□□□□□ -1.2
BRAF-203ENST00000479537 CDKN1CP49918 316 aaPredicted RBP7.56□□□□□ -1.2
BRAF-203ENST00000479537 PRKCQQ04759 706 aa7.56□□□□□ -1.2
BRAF-203ENST00000479537 FAM50AQ14320 339 aaKnown RBP7.56□□□□□ -1.2
BRAF-203ENST00000479537 INF2Q27J81 1249 aa7.56□□□□□ -1.2
BRAF-203ENST00000479537 KIZQ2M2Z5 673 aa7.56□□□□□ -1.2
BRAF-203ENST00000479537 ZCCHC8Q6NZY4 707 aaKnown RBP7.56□□□□□ -1.2
BRAF-203ENST00000479537 LBX2Q6XYB7 198 aa7.56□□□□□ -1.2
BRAF-203ENST00000479537 MISP3Q96FF7 219 aa7.56□□□□□ -1.2
BRAF-203ENST00000479537 WNK4Q96J92 1243 aa7.56□□□□□ -1.2
BRAF-203ENST00000479537 FCRL2Q96LA5 508 aaPredicted RBP7.56□□□□□ -1.2
BRAF-203ENST00000479537 CARS2Q9HA77 564 aaKnown RBP7.56□□□□□ -1.2
BRAF-203ENST00000479537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRAF-203ENST00000479537 SAMD15Q9P1V8 674 aa7.56□□□□□ -1.2
BRAF-203ENST00000479537 ARNTLO00327 626 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 NPHS1O60500 1241 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 ITGB7P26010 798 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 RPL11P62913 178 aaKnown RBP7.55□□□□□ -1.2
BRAF-203ENST00000479537 SART3Q15020 963 aaKnown RBP7.55□□□□□ -1.2
BRAF-203ENST00000479537 TESK1Q15569 626 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 HLA-DQA1Q5Y7H0 255 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 MBLAC2Q68D91 279 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 FERMT3Q86UX7 667 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 IGSF22Q8N9C0 903 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 USP7Q93009 1102 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 CEP89Q96ST8 783 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 ERVK13-1Q9NX77 482 aa7.55□□□□□ -1.2
BRAF-203ENST00000479537 VAV3Q9UKW4 847 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms