RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
BRAF-203ENST00000479537 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
BRAF-203ENST00000479537 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
BRAF-203ENST00000479537 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
BRAF-203ENST00000479537 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
BRAF-203ENST00000479537 FOXD1Q16676 465 aa19■□□□□ 0.63
BRAF-203ENST00000479537 ADRA2BP18089 450 aa18.38■□□□□ 0.53
BRAF-203ENST00000479537 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
BRAF-203ENST00000479537 PIAS4Q8N2W9 510 aaPredicted RBP17.96■□□□□ 0.47
BRAF-203ENST00000479537 MSH5O43196 834 aa17.46■□□□□ 0.39
BRAF-203ENST00000479537 KCNA4P22459 653 aa17.1■□□□□ 0.33
BRAF-203ENST00000479537 PPP4R3CPQ6ZMV5 832 aa16.98■□□□□ 0.31
BRAF-203ENST00000479537 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
BRAF-203ENST00000479537 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
BRAF-203ENST00000479537 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
BRAF-203ENST00000479537 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
BRAF-203ENST00000479537 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
BRAF-203ENST00000479537 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
BRAF-203ENST00000479537 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
BRAF-203ENST00000479537 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
BRAF-203ENST00000479537 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
BRAF-203ENST00000479537 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
BRAF-203ENST00000479537 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
BRAF-203ENST00000479537 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
BRAF-203ENST00000479537 DCAF8L1A6NGE4 600 aa15.75■□□□□ 0.11
BRAF-203ENST00000479537 ZBTB22O15209 634 aa15.7■□□□□ 0.1
BRAF-203ENST00000479537 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
BRAF-203ENST00000479537 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
BRAF-203ENST00000479537 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
BRAF-203ENST00000479537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.05
BRAF-203ENST00000479537 MYCNP04198 464 aaPredicted RBP15.11■□□□□ 0.01
BRAF-203ENST00000479537 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
BRAF-203ENST00000479537 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
BRAF-203ENST00000479537 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
BRAF-203ENST00000479537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
BRAF-203ENST00000479537 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
BRAF-203ENST00000479537 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
BRAF-203ENST00000479537 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
BRAF-203ENST00000479537 APLP2Q06481 763 aa14.69□□□□□ -0.06
BRAF-203ENST00000479537 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
BRAF-203ENST00000479537 SPINK5Q9NQ38 1064 aaPredicted RBP14.66□□□□□ -0.06
BRAF-203ENST00000479537 CAPN15O75808 1086 aa14.61□□□□□ -0.07
BRAF-203ENST00000479537 CACNB1Q02641 598 aaPredicted RBP14.6□□□□□ -0.07
BRAF-203ENST00000479537 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
BRAF-203ENST00000479537 FKBP8Q14318 412 aa14.57□□□□□ -0.08
BRAF-203ENST00000479537 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
BRAF-203ENST00000479537 ABCB7O75027 752 aa14.36□□□□□ -0.11
BRAF-203ENST00000479537 POLA2Q14181 598 aa14.32□□□□□ -0.12
BRAF-203ENST00000479537 DSG3P32926 999 aa14.29□□□□□ -0.12
BRAF-203ENST00000479537 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
BRAF-203ENST00000479537 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
BRAF-203ENST00000479537 FBLN2P98095 1184 aa14.08□□□□□ -0.16
BRAF-203ENST00000479537 SPDYE4A6NLX3 237 aa14.03□□□□□ -0.16
BRAF-203ENST00000479537 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
BRAF-203ENST00000479537 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
BRAF-203ENST00000479537 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
BRAF-203ENST00000479537 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
BRAF-203ENST00000479537 PROM2Q8N271 834 aa13.74□□□□□ -0.21
BRAF-203ENST00000479537 SLC24A1O60721 1099 aa13.69□□□□□ -0.22
BRAF-203ENST00000479537 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
BRAF-203ENST00000479537 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
BRAF-203ENST00000479537 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
BRAF-203ENST00000479537 VASPP50552 380 aaPredicted RBP13.67□□□□□ -0.22
BRAF-203ENST00000479537 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
BRAF-203ENST00000479537 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
BRAF-203ENST00000479537 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
BRAF-203ENST00000479537 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
BRAF-203ENST00000479537 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
BRAF-203ENST00000479537 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
BRAF-203ENST00000479537 KLHL34Q8N239 644 aa13.4□□□□□ -0.26
BRAF-203ENST00000479537 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
BRAF-203ENST00000479537 DCAF8L2P0C7V8 631 aa13.36□□□□□ -0.27
BRAF-203ENST00000479537 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
BRAF-203ENST00000479537 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
BRAF-203ENST00000479537 SPOCK2Q92563 424 aa13.3□□□□□ -0.28
BRAF-203ENST00000479537 MIER1Q8N108 512 aa13.28□□□□□ -0.28
BRAF-203ENST00000479537 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
BRAF-203ENST00000479537 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
BRAF-203ENST00000479537 PKD2Q13563 968 aa13.23□□□□□ -0.29
BRAF-203ENST00000479537 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
BRAF-203ENST00000479537 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
BRAF-203ENST00000479537 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
BRAF-203ENST00000479537 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
BRAF-203ENST00000479537 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
BRAF-203ENST00000479537 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
BRAF-203ENST00000479537 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
BRAF-203ENST00000479537 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
BRAF-203ENST00000479537 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
BRAF-203ENST00000479537 RGL2O15211 777 aa12.95□□□□□ -0.34
BRAF-203ENST00000479537 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
BRAF-203ENST00000479537 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
BRAF-203ENST00000479537 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
BRAF-203ENST00000479537 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
BRAF-203ENST00000479537 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
BRAF-203ENST00000479537 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
BRAF-203ENST00000479537 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
BRAF-203ENST00000479537 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
BRAF-203ENST00000479537 GSE1Q14687 1217 aa12.86□□□□□ -0.35
BRAF-203ENST00000479537 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
BRAF-203ENST00000479537 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms