RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ADCY7P51828 1080 aa19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 CCNA1P78396 465 aa19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 ZSCAN23Q3MJ62 389 aa19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 GALNT17Q6IS24 598 aa19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 NCAPG2Q86XI2 1143 aa19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 CHST13Q8NET6 341 aa19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 SYAP1Q96A49 352 aaPredicted RBP19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 PCDHA4Q9UN74 947 aa19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 TBC1D8O95759 1140 aa19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 MRPL12P52815 198 aaKnown RBP19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 UBE2HP62256 183 aa19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 DAGLBQ8NCG7 672 aa19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 SHCBP1Q8NEM2 672 aa19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 OXER1Q8TDS5 423 aa19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 CUL5Q93034 780 aa19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 CFHR5Q9BXR6 569 aa19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 ACAD9Q9H845 621 aa19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 CNPY2Q9Y2B0 182 aa19.37■□□□□ 0.69
EXOSC3-203ENST00000465229 BTBD18B2RXH4 712 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 MEIS2O14770 477 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 COPB2P35606 906 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 USP17L6PQ6QN14 398 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 MCF2L2Q86YR7 1114 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 DIS3L2Q8IYB7 885 aaKnown RBP19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 BLIDQ8IZY5 108 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 GLT8D2Q9H1C3 349 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 ZSCAN16Q9H4T2 348 aaPredicted RBP19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 MROH8Q9H579 483 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 EFCC1Q9HA90 598 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 GRPEL1Q9HAV7 217 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 FBXO40Q9UH90 709 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 ELP1O95163 1332 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 M0R2N6 131 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 CFBP00751 764 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 XRCC6P12956 609 aaKnown RBP eCLIP19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 KRT85P78386 507 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 GHRHRQ02643 423 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 SAFBQ15424 915 aaKnown RBP eCLIP19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 UBE2SQ16763 222 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 BICD2Q8TD16 824 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 THSD7BQ9C0I4 1608 aa19.36■□□□□ 0.69
EXOSC3-203ENST00000465229 GCOM1H8Y6P7 765 aaPredicted RBP19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 PIK3CDO00329 1044 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 POLR2MP0CAP2 368 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 HOXA13P31271 388 aaPredicted RBP19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 KRT2P35908 639 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 HSD17B4P51659 736 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 DNM1Q05193 864 aaKnown RBP19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 NR5A1Q13285 461 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 FOXD4L6Q3SYB3 417 aaPredicted RBP19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 FOXD4L3Q6VB84 417 aaPredicted RBP19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 NSMFQ6X4W1 530 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 GAS2L3Q86XJ1 694 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 RASGRP4Q8TDF6 673 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 BRMS1Q9HCU9 246 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 TMEM63CQ9P1W3 806 aa19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 BIN2Q9UBW5 565 aaPredicted RBP19.35■□□□□ 0.69
EXOSC3-203ENST00000465229 KIF28PB7ZC32 967 aa19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 CLK2P49760 499 aaKnown RBP19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 MAP2K1Q02750 393 aaPredicted RBP19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 WDR78Q5VTH9 848 aa19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 TEX2Q8IWB9 1127 aa19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 REXO1Q8N1G1 1221 aaKnown RBP19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 TNFRSF25Q93038 417 aa19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 FOXP1Q9H334 677 aaPredicted RBP19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 GDPD2Q9HCC8 539 aa19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 A1CFQ9NQ94 594 aaKnown RBP19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 PCDHA6Q9UN73 950 aa19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 PCDHA8Q9Y5H6 950 aa19.34■□□□□ 0.69
EXOSC3-203ENST00000465229 GADD45BO75293 160 aaPredicted RBP19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 U2AF2P26368 475 aaKnown RBP eCLIP19.33■□□□□ 0.695e-10■■■■■ 27.4
EXOSC3-203ENST00000465229 RPS6P62753 249 aaKnown RBP19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 BAATQ14032 418 aaPredicted RBP19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 RNF207Q6ZRF8 634 aa19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 FERMT3Q86UX7 667 aa19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 CCAR1Q8IX12 1150 aaKnown RBP19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 SAMD3Q8N6K7 520 aa19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 SCAND2PQ9GZW5 306 aaPredicted RBP19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 MAF1Q9H063 256 aa19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 TMEM260Q9NX78 707 aa19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 MAP3K20Q9NYL2 800 aaKnown RBP19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 CYP39A1Q9NYL5 469 aa19.33■□□□□ 0.69
EXOSC3-203ENST00000465229 MAPK4P31152 587 aa19.33■□□□□ 0.68
EXOSC3-203ENST00000465229 RESTQ13127 1097 aa19.33■□□□□ 0.68
EXOSC3-203ENST00000465229 NOM1Q5C9Z4 860 aaKnown RBP19.33■□□□□ 0.68
EXOSC3-203ENST00000465229 JAKMIP3Q5VZ66 844 aa19.33■□□□□ 0.68
EXOSC3-203ENST00000465229 ANKRD35Q8N283 1001 aa19.33■□□□□ 0.68
EXOSC3-203ENST00000465229 SYTL5Q8TDW5 730 aaPredicted RBP19.33■□□□□ 0.68
EXOSC3-203ENST00000465229 SAGE1Q9NXZ1 904 aa19.33■□□□□ 0.68
EXOSC3-203ENST00000465229 COL20A1Q9P218 1284 aa19.33■□□□□ 0.68
EXOSC3-203ENST00000465229 EARS2Q5JPH6 523 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-203ENST00000465229 SLC30A10Q6XR72 485 aa19.32■□□□□ 0.68
EXOSC3-203ENST00000465229 GPR142Q7Z601 462 aa19.32■□□□□ 0.68
EXOSC3-203ENST00000465229 FIBPO43427 364 aa19.31■□□□□ 0.68
EXOSC3-203ENST00000465229 STRNO43815 780 aa19.31■□□□□ 0.68
EXOSC3-203ENST00000465229 FCER1AP12319 257 aa19.31■□□□□ 0.68
EXOSC3-203ENST00000465229 GNL2Q13823 731 aaKnown RBP19.31■□□□□ 0.68
EXOSC3-203ENST00000465229 ATL3Q6DD88 541 aa19.31■□□□□ 0.68
EXOSC3-203ENST00000465229 FCHSD1Q86WN1 690 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms