RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 CATSPERGQ6ZRH7 1159 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 FAM178BQ8IXR5 827 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 APPBP2Q92624 585 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 KCNB2Q92953 911 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 DYNLL2Q96FJ2 89 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 MAML3Q96JK9 1138 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 C12orf42Q96LP6 360 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 GLT1D1Q96MS3 346 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 STRBPQ96SI9 672 aaKnown RBP10.2□□□□□ -0.78
HDAC1-202ENST00000428704 ZBED2Q9BTP6 218 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 SLC4A5Q9BY07 1137 aa10.2□□□□□ -0.78
HDAC1-202ENST00000428704 ROBO3Q96MS0 1386 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 TLR3O15455 904 aaKnown RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 RNF113AO15541 343 aaKnown RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 DCXO43602 365 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 POLR3DP05423 398 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 CA3P07451 260 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 ATP2A2P16615 1042 aaKnown RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 CYP2C18P33260 490 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 MCM4P33991 863 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 DEKP35659 375 aaKnown RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 ABCB5Q2M3G0 1257 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 CERKLQ49MI3 558 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 TMEM67Q5HYA8 995 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 C12orf60Q5U649 245 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 GPIHBP1Q8IV16 184 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 ARNTL2Q8WYA1 636 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 VTI1AQ96AJ9 217 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 LENG1Q96BZ8 264 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 MFSD14AQ96MC6 490 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 MOV10L1Q9BXT6 1211 aaKnown RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 LSG1Q9H089 658 aaKnown RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 EPB41L4AQ9HCS5 686 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-202ENST00000428704 ATP8A2Q9NTI2 1148 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 NRBP1Q9UHY1 535 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 SLC4A4Q9Y6R1 1079 aa10.19□□□□□ -0.78
HDAC1-202ENST00000428704 CFAP54Q96N23 3096 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 RAD50Q92878 1312 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 EPOPA6NHQ4 379 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 GSG1L2A8MUP6 293 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 USP17L12C9JPN9 530 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 USP17L21D6R901 530 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 GPAA1O43292 621 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 ADAMTS4O75173 837 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 AKR1A1P14550 325 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 VCAM1P19320 739 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 ERCC3P19447 782 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 PTMSP20962 102 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 USP14P54578 494 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 CUL4AQ13619 759 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 SEPT2Q15019 361 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 KCNA10Q16322 511 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 CTR9Q6PD62 1173 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 CLEC10AQ8IUN9 316 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 ACER1Q8TDN7 264 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 SEC62Q99442 399 aaKnown RBP10.18□□□□□ -0.78
HDAC1-202ENST00000428704 ANO2Q9NQ90 1003 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 ZDBF2Q9HCK1 2354 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 USP34Q70CQ2 3546 aa10.18□□□□□ -0.78
HDAC1-202ENST00000428704 PRRC2BQ5JSZ5 2229 aaKnown RBP10.18□□□□□ -0.78
HDAC1-202ENST00000428704 MYH4Q9Y623 1939 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 COL11A1P12107 1806 aaPredicted RBP10.17□□□□□ -0.78
HDAC1-202ENST00000428704 ELP1O95163 1332 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 A0A1W2PRG0 241 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 TK2O00142 265 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 FOXP2O15409 715 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 GFRA3O60609 400 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 ZFYP08048 801 aaPredicted RBP10.17□□□□□ -0.78
HDAC1-202ENST00000428704 AKR1B1P15121 316 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 CDK7P50613 346 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 PTPN5P54829 565 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 NUCB2P80303 420 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 ZMYM1Q5SVZ6 1142 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 KIAA1211Q6ZU35 1233 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 HFE2Q6ZVN8 426 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 C16orf86Q6ZW13 317 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 NCAPG2Q86XI2 1143 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 ABRAQ8N0Z2 381 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 SHCBP1Q8NEM2 672 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 ANKS1AQ92625 1134 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 INTS4Q96HW7 963 aaKnown RBP10.17□□□□□ -0.78
HDAC1-202ENST00000428704 FSD1Q9BTV5 496 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 SPATC1LQ9H0A9 340 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 KIAA1683Q9H0B3 1180 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 RPAP3Q9H6T3 665 aaPredicted RBP10.17□□□□□ -0.78
HDAC1-202ENST00000428704 ARPP21Q9UBL0 812 aaPredicted RBP10.17□□□□□ -0.78
HDAC1-202ENST00000428704 SWAP70Q9UH65 585 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 LAMA4Q16363 1823 aa10.17□□□□□ -0.78
HDAC1-202ENST00000428704 SYNRGQ9UMZ2 1314 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 TRANK1O15050 2925 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 A0A0U1RQG5 324 aaPredicted RBP10.16□□□□□ -0.78
HDAC1-202ENST00000428704 DDX11L8A8MPP1 907 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 ARVCFO00192 962 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 GPR37O15354 613 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 HSP90AA1P07900 732 aaKnown RBP10.16□□□□□ -0.78
HDAC1-202ENST00000428704 FCER1AP12319 257 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 TAL1P17542 331 aaPredicted RBP10.16□□□□□ -0.78
HDAC1-202ENST00000428704 CDK8P49336 464 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 NEK4P51957 841 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 CCL23P55773 120 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms