RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 USP6NLQ92738 828 aa20.17■□□□□ 0.82
LIMS2-211ENST00000426981 ATG4CQ96DT6 458 aa20.17■□□□□ 0.82
LIMS2-211ENST00000426981 TAF6LQ9Y6J9 622 aa20.17■□□□□ 0.82
LIMS2-211ENST00000426981 CDKL5O76039 1030 aa20.16■□□□□ 0.82
LIMS2-211ENST00000426981 CTDNEP1O95476 244 aa20.16■□□□□ 0.82
LIMS2-211ENST00000426981 U2AF2P26368 475 aaKnown RBP eCLIP20.16■□□□□ 0.82
LIMS2-211ENST00000426981 MAPK4P31152 587 aa20.16■□□□□ 0.82
LIMS2-211ENST00000426981 PPARAQ07869 468 aa20.16■□□□□ 0.82
LIMS2-211ENST00000426981 IMMTQ16891 758 aaKnown RBP20.16■□□□□ 0.82
LIMS2-211ENST00000426981 MORN1Q5T089 497 aa20.16■□□□□ 0.82
LIMS2-211ENST00000426981 PLEKHH3Q7Z736 793 aa20.16■□□□□ 0.82
LIMS2-211ENST00000426981 NUP88Q99567 741 aaPredicted RBP20.16■□□□□ 0.82
LIMS2-211ENST00000426981 NUDT12Q9BQG2 462 aa20.16■□□□□ 0.82
LIMS2-211ENST00000426981 L2HGDHQ9H9P8 463 aa20.16■□□□□ 0.82
LIMS2-211ENST00000426981 IGKV6D-41A0A0C4DH26 115 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 FLOT1O75955 427 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 GJB1P08034 283 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 HSPD1P10809 573 aaKnown RBP20.15■□□□□ 0.82
LIMS2-211ENST00000426981 DSG3P32926 999 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 STOX1Q6ZVD7 989 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 ZNF444Q8N0Y2 327 aaPredicted RBP20.15■□□□□ 0.82
LIMS2-211ENST00000426981 LINC00301Q8NCQ3 95 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 LPAR1Q92633 364 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 NACAP1Q9BZK3 213 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 GOLPH3LQ9H4A5 285 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 MYH4Q9Y623 1939 aa20.15■□□□□ 0.82
LIMS2-211ENST00000426981 A0A0G2JMZ2 1700 aa20.14■□□□□ 0.82
LIMS2-211ENST00000426981 GOLGA6L9A6NEM1 432 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 SFPQP23246 707 aaKnown RBP eCLIP20.14■□□□□ 0.81
LIMS2-211ENST00000426981 CMA1P23946 247 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 GJA8P48165 433 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 APOBRQ0VD83 1088 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 FAM83BQ5T0W9 1011 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 CPLX2Q6PUV4 134 aaKnown RBP20.14■□□□□ 0.81
LIMS2-211ENST00000426981 SYNE3Q6ZMZ3 975 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 U2AF1L4Q8WU68 220 aaKnown RBP20.14■□□□□ 0.81
LIMS2-211ENST00000426981 CEP95Q96GE4 821 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 C8orf76Q96K31 380 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 DEFB118Q96PH6 123 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 MOV10L1Q9BXT6 1211 aaKnown RBP20.14■□□□□ 0.81
LIMS2-211ENST00000426981 PCDHA7Q9UN72 937 aa20.14■□□□□ 0.81
LIMS2-211ENST00000426981 COL11A1P12107 1806 aaPredicted RBP20.14■□□□□ 0.81
LIMS2-211ENST00000426981 WDR46O15213 610 aaKnown RBP20.13■□□□□ 0.81
LIMS2-211ENST00000426981 SPTLC2O15270 562 aa20.13■□□□□ 0.81
LIMS2-211ENST00000426981 HMGCRP04035 888 aa20.13■□□□□ 0.81
LIMS2-211ENST00000426981 SLC3A2P08195 630 aaKnown RBP20.13■□□□□ 0.81
LIMS2-211ENST00000426981 AOPEPQ8N6M6 819 aa20.13■□□□□ 0.81
LIMS2-211ENST00000426981 SH2D4AQ9H788 454 aa20.13■□□□□ 0.81
LIMS2-211ENST00000426981 HOXC10Q9NYD6 342 aa20.13■□□□□ 0.81
LIMS2-211ENST00000426981 PHLPP2Q6ZVD8 1323 aa20.13■□□□□ 0.81
LIMS2-211ENST00000426981 ATP8B1O43520 1251 aa20.12■□□□□ 0.81
LIMS2-211ENST00000426981 TFAP4Q01664 338 aa20.12■□□□□ 0.81
LIMS2-211ENST00000426981 FBXO18Q8NFZ0 1043 aa20.12■□□□□ 0.81
LIMS2-211ENST00000426981 SPATC1LQ9H0A9 340 aa20.12■□□□□ 0.81
LIMS2-211ENST00000426981 ARGLU1Q9NWB6 273 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-211ENST00000426981 FAM53CQ9NYF3 392 aa20.12■□□□□ 0.81
LIMS2-211ENST00000426981 FLRT1Q9NZU1 646 aa20.12■□□□□ 0.81
LIMS2-211ENST00000426981 NYAP2Q9P242 653 aa20.12■□□□□ 0.81
LIMS2-211ENST00000426981 HOOK1Q9UJC3 728 aaKnown RBP20.12■□□□□ 0.81
LIMS2-211ENST00000426981 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.12■□□□□ 0.81
LIMS2-211ENST00000426981 FAM237AA0A1B0GTK4 181 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 CCDC66A2RUB6 948 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 F5H6K3 240 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 PPP6R2O75170 966 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 SGPL1O95470 568 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 NDUFB10O96000 172 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 PTPREP23469 700 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 CCNA1P78396 465 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 KLRC3Q07444 240 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 PLS1Q14651 629 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 BMS1Q14692 1282 aaKnown RBP20.11■□□□□ 0.81
LIMS2-211ENST00000426981 FILIP1Q7Z7B0 1213 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 LRRC47Q8N1G4 583 aaKnown RBP20.11■□□□□ 0.81
LIMS2-211ENST00000426981 NPLOC4Q8TAT6 608 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 NKX2-3Q8TAU0 364 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 SOCS4Q8WXH5 440 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 GOPCQ9HD26 462 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 PAK6Q9NQU5 681 aaPredicted RBP20.11■□□□□ 0.81
LIMS2-211ENST00000426981 MTMR4Q9NYA4 1195 aa20.11■□□□□ 0.81
LIMS2-211ENST00000426981 FGAP02671 866 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 ERCC3P19447 782 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 MAP2K5Q13163 448 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 TMEM132BQ14DG7 1078 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 MYSM1Q5VVJ2 828 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 NEDD1Q8NHV4 660 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 NCOA7Q8NI08 942 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 ARID3AQ99856 593 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.1■□□□□ 0.81
LIMS2-211ENST00000426981 CPLX1O14810 134 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 NMT2O60551 498 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 TSPY3P0CV98 308 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 TSPY8P0CW00 308 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 XRCC5P13010 732 aaKnown RBP20.1■□□□□ 0.81
LIMS2-211ENST00000426981 RGS2P41220 211 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 PDE4BQ07343 736 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 UBE2Q1Q7Z7E8 422 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 ZNF592Q92610 1267 aa20.1■□□□□ 0.81
LIMS2-211ENST00000426981 LAMA4Q16363 1823 aa20.09■□□□□ 0.81
LIMS2-211ENST00000426981 SLC15A5A6NIM6 579 aa20.09■□□□□ 0.81
LIMS2-211ENST00000426981 ZSCAN12O43309 604 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms