RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 WDR19Q8NEZ3 1342 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 ITGB8P26012 769 aa19.16■□□□□ 0.66
DDR1-229ENST00000396342 NUCB1Q02818 461 aa19.16■□□□□ 0.66
DDR1-229ENST00000396342 TRDNQ13061 729 aa19.16■□□□□ 0.66
DDR1-229ENST00000396342 FAM126BQ8IXS8 530 aa19.16■□□□□ 0.66
DDR1-229ENST00000396342 OR6J1Q8NGC5 347 aa19.16■□□□□ 0.66
DDR1-229ENST00000396342 SCFD2Q8WU76 684 aa19.16■□□□□ 0.66
DDR1-229ENST00000396342 OSBPL3Q9H4L5 887 aa19.16■□□□□ 0.66
DDR1-229ENST00000396342 NFIBO00712 420 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 ADCY6O43306 1168 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 KDM4AO75164 1064 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 FGBP02675 491 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 MYL3P08590 195 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 CSF2RAP15509 400 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 DNAJB2P25686 324 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 TRAF1Q13077 416 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 RAB30Q15771 203 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 USH1GQ495M9 461 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 ASPRV1Q53RT3 343 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 PNMA1Q8ND90 353 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 RUFY2Q8WXA3 655 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 TIFAQ96CG3 184 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 GAS2L1Q99501 681 aaPredicted RBP19.15■□□□□ 0.66
DDR1-229ENST00000396342 IL23AQ9NPF7 189 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 PDGFCQ9NRA1 345 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 NOD1Q9Y239 953 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 PARP14Q460N5 1801 aa19.15■□□□□ 0.66
DDR1-229ENST00000396342 MYH4Q9Y623 1939 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 EPHB4P54760 987 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 TTLL4Q14679 1199 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 FAM47CQ5HY64 1035 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 TAPT1Q6NXT6 567 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 PLEKHM2Q8IWE5 1019 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 MORC4Q8TE76 937 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 MYLIPQ8WY64 445 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 ZSCAN10Q96SZ4 725 aaPredicted RBP19.14■□□□□ 0.65
DDR1-229ENST00000396342 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.14■□□□□ 0.653e-6■■□□□ 11.5
DDR1-229ENST00000396342 ZKSCAN3Q9BRR0 538 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 MTG1Q9BT17 334 aaPredicted RBP19.14■□□□□ 0.65
DDR1-229ENST00000396342 DSCC1Q9BVC3 393 aa19.14■□□□□ 0.65
DDR1-229ENST00000396342 ERICH2A1L162 156 aa19.13■□□□□ 0.65
DDR1-229ENST00000396342 PARP1P09874 1014 aaKnown RBP19.13■□□□□ 0.65
DDR1-229ENST00000396342 CYP2C18P33260 490 aa19.13■□□□□ 0.65
DDR1-229ENST00000396342 RPS6P62753 249 aaKnown RBP19.13■□□□□ 0.65
DDR1-229ENST00000396342 IRX5P78411 483 aaPredicted RBP19.13■□□□□ 0.65
DDR1-229ENST00000396342 ZNF365Q70YC5 407 aa19.13■□□□□ 0.65
DDR1-229ENST00000396342 RASGRP2Q7LDG7 609 aa19.13■□□□□ 0.65
DDR1-229ENST00000396342 TBC1D10CQ8IV04 446 aa19.13■□□□□ 0.65
DDR1-229ENST00000396342 RETREG2Q8NC44 543 aa19.13■□□□□ 0.65
DDR1-229ENST00000396342 RGS22Q8NE09 1264 aa19.13■□□□□ 0.65
DDR1-229ENST00000396342 MRPL11Q9Y3B7 192 aaKnown RBP19.13■□□□□ 0.65
DDR1-229ENST00000396342 ABCB11O95342 1321 aa19.13■□□□□ 0.65
DDR1-229ENST00000396342 ZNFX1Q9P2E3 1918 aaKnown RBP19.13■□□□□ 0.65
DDR1-229ENST00000396342 PLXNA1Q9UIW2 1896 aa19.12■□□□□ 0.65
DDR1-229ENST00000396342 GOLGA8HP0CJ92 632 aa19.12■□□□□ 0.65
DDR1-229ENST00000396342 ACTN1P12814 892 aa19.12■□□□□ 0.65
DDR1-229ENST00000396342 TMEM240Q5SV17 173 aa19.12■□□□□ 0.65
DDR1-229ENST00000396342 SLC30A10Q6XR72 485 aa19.12■□□□□ 0.65
DDR1-229ENST00000396342 NSUN6Q8TEA1 469 aaKnown RBP19.12■□□□□ 0.65
DDR1-229ENST00000396342 ZNF576Q9H609 170 aa19.12■□□□□ 0.65
DDR1-229ENST00000396342 ZBBXA8MT70 800 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 CTAGE5O15320 804 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 CD4P01730 458 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 PFKMP08237 780 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 SNHG28P0DPA3 235 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 ACRP10323 421 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 TXNP10599 105 aaKnown RBP19.11■□□□□ 0.65
DDR1-229ENST00000396342 CHMP4BP1P59074 171 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 CDC37Q16543 378 aaPredicted RBP19.11■□□□□ 0.65
DDR1-229ENST00000396342 IFIT1BQ5T764 474 aaKnown RBP19.11■□□□□ 0.65
DDR1-229ENST00000396342 CCDC155Q8N6L0 562 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 SLC43A3Q8NBI5 491 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 UBA5Q9GZZ9 404 aa19.11■□□□□ 0.65
DDR1-229ENST00000396342 ASTN1O14525 1302 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 NEDD4P46934 1319 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 SZT2Q5T011 3432 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 B4E1Z4 1266 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 CCL23P55773 120 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 PSMC6P62333 389 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 SART3Q15020 963 aaKnown RBP19.1■□□□□ 0.65
DDR1-229ENST00000396342 FBXO11Q86XK2 927 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 EXOC6Q8TAG9 804 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 CLEC4DQ8WXI8 215 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 SYMPKQ92797 1274 aaKnown RBP19.1■□□□□ 0.65
DDR1-229ENST00000396342 PURBQ96QR8 312 aaKnown RBP19.1■□□□□ 0.65
DDR1-229ENST00000396342 TRPV6Q9H1D0 765 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 ALDH8A1Q9H2A2 487 aaPredicted RBP19.1■□□□□ 0.65
DDR1-229ENST00000396342 TTYH1Q9H313 450 aaPredicted RBP19.1■□□□□ 0.65
DDR1-229ENST00000396342 SLC28A3Q9HAS3 691 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 VAT1LQ9HCJ6 419 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 SLC4A7Q9Y6M7 1214 aa19.1■□□□□ 0.65
DDR1-229ENST00000396342 SMCHD1A6NHR9 2005 aa19.09■□□□□ 0.65
DDR1-229ENST00000396342 RBM47A0AV96 593 aaKnown RBP19.09■□□□□ 0.65
DDR1-229ENST00000396342 STXBP2Q15833 593 aa19.09■□□□□ 0.65
DDR1-229ENST00000396342 ARHGEF16Q5VV41 709 aa19.09■□□□□ 0.65
DDR1-229ENST00000396342 RALYLQ86SE5 291 aaKnown RBP19.09■□□□□ 0.65
DDR1-229ENST00000396342 ADGRF4Q8IZF3 695 aa19.09■□□□□ 0.65
DDR1-229ENST00000396342 HERVK_113Q902F9 699 aa19.09■□□□□ 0.65
DDR1-229ENST00000396342 IWS1Q96ST2 819 aa19.09■□□□□ 0.65
DDR1-229ENST00000396342 U3KPZ7 1027 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms