RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 SCNN1DP51172 638 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 GTF2IP78347 998 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 ATP2C1P98194 919 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-204ENST00000394164 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 ZNF804AQ7Z570 1209 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 SH2D3CQ8N5H7 860 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 ENOX1Q8TC92 643 aaKnown RBP11.1□□□□□ -0.63
PSEN1-204ENST00000394164 MAD2L2Q9UI95 211 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 AHDC1Q5TGY3 1603 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-204ENST00000394164 CCDC189A1A4V9 331 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 ZNF185O15231 689 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 KIF1CO43896 1103 aaKnown RBP11.09□□□□□ -0.63
PSEN1-204ENST00000394164 SKAP2O75563 359 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-204ENST00000394164 ZNF18P17022 549 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 SATB1Q01826 763 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 LRRC47Q8N1G4 583 aaKnown RBP11.09□□□□□ -0.63
PSEN1-204ENST00000394164 WDR66Q8TBY9 1149 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 COG1Q8WTW3 980 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 FERMT2Q96AC1 680 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 EYA3Q99504 573 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 NID2Q14112 1375 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 FGRP09769 529 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 NF2P35240 595 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 NAPAP54920 295 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 PPP2R5BQ15173 497 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 WHAMMP3Q1A5X7 153 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 SND1Q7KZF4 910 aaKnown RBP eCLIP11.09□□□□□ -0.632e-8■■■■□ 24.4
PSEN1-204ENST00000394164 HPS3Q969F9 1004 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-204ENST00000394164 CD209Q9NNX6 404 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 BIN2Q9UBW5 565 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-204ENST00000394164 PPP1R3GB7ZBB8 358 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-204ENST00000394164 N4BP3O15049 544 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 ATP1A1P05023 1023 aaKnown RBP11.09□□□□□ -0.63
PSEN1-204ENST00000394164 SERPINB2P05120 415 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 RASA1P20936 1047 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 USP14P54578 494 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 C2orf54Q08AI8 447 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 NR1I3Q14994 352 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 NAIF1Q69YI7 327 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-204ENST00000394164 GJA10Q969M2 543 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 MTA3Q9BTC8 594 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 POLLQ9UGP5 575 aa11.09□□□□□ -0.63
PSEN1-204ENST00000394164 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-204ENST00000394164 CCNT1O60563 726 aaKnown RBP11.08□□□□□ -0.64
PSEN1-204ENST00000394164 TRIM37O94972 964 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 ELF1P32519 619 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 CDK8P49336 464 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 AARSP49588 968 aaKnown RBP eCLIP11.08□□□□□ -0.64
PSEN1-204ENST00000394164 RCAN1P53805 252 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 ERVK-24P63145 666 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 E2F5Q15329 346 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 NT5DC1Q5TFE4 455 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 POTEDQ86YR6 584 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 GPCPD1Q9NPB8 672 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 TMEM260Q9NX78 707 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 PCDHA6Q9UN73 950 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 PCDHA8Q9Y5H6 950 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 WNK3Q9BYP7 1800 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 USP17L5A8MUK1 530 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 EIF3HO15372 352 aaKnown RBP eCLIP11.08□□□□□ -0.64
PSEN1-204ENST00000394164 ATP2C2O75185 946 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 UBA7P41226 1012 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 EZH2Q15910 746 aaKnown RBP11.08□□□□□ -0.64
PSEN1-204ENST00000394164 RC3H1Q5TC82 1133 aaKnown RBP11.08□□□□□ -0.64
PSEN1-204ENST00000394164 SPATA1Q5VX52 437 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 DTHD1Q6ZMT9 781 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 PRPF38AQ8NAV1 312 aaKnown RBP11.08□□□□□ -0.64
PSEN1-204ENST00000394164 NELFBQ8WX92 580 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 CEP95Q96GE4 821 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 PIGSQ96S52 555 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 NUP88Q99567 741 aaPredicted RBP11.08□□□□□ -0.64
PSEN1-204ENST00000394164 GGA1Q9UJY5 639 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 PCDHA4Q9UN74 947 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 ZC3H4Q9UPT8 1303 aaKnown RBP11.08□□□□□ -0.64
PSEN1-204ENST00000394164 NRAPQ86VF7 1730 aa11.08□□□□□ -0.64
PSEN1-204ENST00000394164 FAM196BA6NMK8 535 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 MFAP3LO75121 409 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 CACNB3P54284 484 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 SLC7A5Q01650 507 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 PPFIA1Q13136 1202 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 SBK1Q52WX2 424 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 ARL8AQ96BM9 186 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 COA7Q96BR5 231 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 SCLT1Q96NL6 688 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 PANX2Q96RD6 677 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 ODF2LQ9ULJ1 636 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 GRIN2DO15399 1336 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 RPSAP08865 295 aaKnown RBP11.07□□□□□ -0.64
PSEN1-204ENST00000394164 ARHGAP25P42331 645 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 TECP42680 631 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 PRCPP42785 496 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 WDR93Q6P2C0 686 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 PSMB7Q99436 277 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 CHP1Q99653 195 aa11.07□□□□□ -0.64
PSEN1-204ENST00000394164 RTFDC1Q9BY42 306 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms