RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 TAPT1Q6NXT6 567 aa17.62■□□□□ 0.41
CDKN1A-202ENST00000373711 GMCL1Q96IK5 515 aa17.62■□□□□ 0.41
CDKN1A-202ENST00000373711 CERS4Q9HA82 394 aa17.62■□□□□ 0.41
CDKN1A-202ENST00000373711 TRMT13Q9NUP7 481 aaKnown RBP17.62■□□□□ 0.41
CDKN1A-202ENST00000373711 PIEZO1Q92508 2521 aa17.62■□□□□ 0.41
CDKN1A-202ENST00000373711 RFXAPO00287 272 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 CYP2C9P11712 490 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 KCNJ6P48051 423 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 BFSP2Q13515 415 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 LRRFIP1Q32MZ4 808 aaKnown RBP17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 EEPD1Q7L9B9 569 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 HERC6Q8IVU3 1022 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 APPBP2Q92624 585 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 MPHOSPH6Q99547 160 aaKnown RBP17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 MTG1Q9BT17 334 aaPredicted RBP17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 FTOQ9C0B1 505 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 PDGFCQ9NRA1 345 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 CYP39A1Q9NYL5 469 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 LMCD1Q9NZU5 365 aa17.61■□□□□ 0.41
CDKN1A-202ENST00000373711 MUC6Q6W4X9 2439 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 KPNA6O60684 536 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 CHGBP05060 677 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 APPP05067 770 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 ZFYP08048 801 aaPredicted RBP17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 PURAQ00577 322 aaKnown RBP17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 TAP1Q03518 808 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 PTPN11Q06124 597 aaPredicted RBP17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 FAM47CQ5HY64 1035 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 NEDD1Q8NHV4 660 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 NACAP1Q9BZK3 213 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 NOD1Q9Y239 953 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 ZNF536O15090 1300 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 TRIP12Q14669 1992 aaPredicted RBP17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 BRWD1Q9NSI6 2320 aa17.6■□□□□ 0.41
CDKN1A-202ENST00000373711 NKRFO15226 690 aaKnown RBP eCLIP17.59■□□□□ 0.413e-7■■■□□ 18.5
CDKN1A-202ENST00000373711 PRDM1O75626 825 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 MYL3P08590 195 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 NFRKBQ6P4R8 1299 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 NSMFQ6X4W1 530 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 PANK1Q8TE04 598 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 MORC4Q8TE76 937 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 VWCEQ96DN2 955 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 GPATCH3Q96I76 525 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 WDR11Q9BZH6 1224 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 CCPG1Q9ULG6 757 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 PTPRSQ13332 1948 aa17.59■□□□□ 0.41
CDKN1A-202ENST00000373711 GPAA1O43292 621 aa17.58■□□□□ 0.4
CDKN1A-202ENST00000373711 GRB10Q13322 594 aa17.58■□□□□ 0.4
CDKN1A-202ENST00000373711 KBTBD3Q8NAB2 608 aa17.58■□□□□ 0.4
CDKN1A-202ENST00000373711 TET1Q8NFU7 2136 aa17.58■□□□□ 0.4
CDKN1A-202ENST00000373711 OR6J1Q8NGC5 347 aa17.58■□□□□ 0.4
CDKN1A-202ENST00000373711 LRRCC1Q9C099 1032 aa17.58■□□□□ 0.4
CDKN1A-202ENST00000373711 SIP14410 1827 aa17.58■□□□□ 0.4
CDKN1A-202ENST00000373711 EPOPA6NHQ4 379 aa17.57■□□□□ 0.4
CDKN1A-202ENST00000373711 PI4K2BG5E9Z4 385 aa17.57■□□□□ 0.4
CDKN1A-202ENST00000373711 IQCF3P0C7M6 154 aa17.57■□□□□ 0.4
CDKN1A-202ENST00000373711 ECHDC1Q9NTX5 307 aa17.57■□□□□ 0.4
CDKN1A-202ENST00000373711 PNMA2Q9UL42 364 aa17.57■□□□□ 0.4
CDKN1A-202ENST00000373711 B4DLN1 442 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 RNF113AO15541 343 aaKnown RBP17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 PARNO95453 639 aaKnown RBP17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 ICAM1P05362 532 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 MCCP23508 829 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 ALDH5A1P51649 535 aaPredicted RBP17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 MRPL12P52815 198 aaKnown RBP17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 TFAP4Q01664 338 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 PPP2R5BQ15173 497 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 NBPF20Q3BBV1 942 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 MUM1L1Q5H9M0 696 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 KRT40Q6A162 431 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 CAGE1Q8TC20 777 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 OSBP2Q969R2 916 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 ZBED2Q9BTP6 218 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 EPB41L4AQ9HCS5 686 aaPredicted RBP17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 PRR12Q9ULL5 1215 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 STX8Q9UNK0 236 aa17.56■□□□□ 0.4
CDKN1A-202ENST00000373711 PRR33A8MZF0 331 aa17.55■□□□□ 0.4
CDKN1A-202ENST00000373711 PATL2C9JE40 543 aaKnown RBP17.55■□□□□ 0.4
CDKN1A-202ENST00000373711 PTGS1P23219 599 aa17.55■□□□□ 0.4
CDKN1A-202ENST00000373711 KCTD1Q719H9 257 aa17.55■□□□□ 0.4
CDKN1A-202ENST00000373711 AFAP1L1Q8TED9 768 aa17.55■□□□□ 0.4
CDKN1A-202ENST00000373711 NAPBQ9H115 298 aa17.55■□□□□ 0.4
CDKN1A-202ENST00000373711 RBM47A0AV96 593 aaKnown RBP17.54■□□□□ 0.4
CDKN1A-202ENST00000373711 FAM86C2PA6NEL3 165 aa17.54■□□□□ 0.4
CDKN1A-202ENST00000373711 SIRT2Q8IXJ6 389 aa17.54■□□□□ 0.4
CDKN1A-202ENST00000373711 IFNL3Q8IZI9 196 aa17.54■□□□□ 0.4
CDKN1A-202ENST00000373711 SCFD2Q8WU76 684 aa17.54■□□□□ 0.4
CDKN1A-202ENST00000373711 ZBTB40Q9NUA8 1239 aa17.54■□□□□ 0.4
CDKN1A-202ENST00000373711 PTPDC1A2A3K4 754 aa17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 TSPY2A6NKD2 308 aa17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 EFCAB14O75071 495 aa17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 ALADP13716 330 aa17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 PDE4DQ08499 809 aa17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 BAATQ14032 418 aaPredicted RBP17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 CSPP1Q1MSJ5 1256 aa17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 CCDC96Q2M329 555 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms