RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 MAD2L2Q9UI95 211 aa15.22■□□□□ 0.03
PMF1-201ENST00000368273 KIAA0100Q14667 2235 aaKnown RBP15.21■□□□□ 0.03
PMF1-201ENST00000368273 ZNF536O15090 1300 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 COBLO75128 1261 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 PARP1P09874 1014 aaKnown RBP15.21■□□□□ 0.03
PMF1-201ENST00000368273 GUCY1B3Q02153 619 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 TRIM32Q13049 653 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 KCTD2Q14681 263 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 CCL14Q16627 93 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 DPP9Q86TI2 863 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 CCDC82Q8N4S0 544 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 NPLOC4Q8TAT6 608 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 CHAMP1Q96JM3 812 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 RNF208Q9H0X6 261 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 UNC93B1Q9H1C4 597 aa15.21■□□□□ 0.03
PMF1-201ENST00000368273 ZNFX1Q9P2E3 1918 aaKnown RBP15.2■□□□□ 0.02
PMF1-201ENST00000368273 GOLGA8HP0CJ92 632 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 SNAP25P60880 206 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 TRIM29Q14134 588 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 PKN1Q16512 942 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
PMF1-201ENST00000368273 MAP3K21Q5TCX8 1036 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 KRT40Q6A162 431 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
PMF1-201ENST00000368273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.2■□□□□ 0.02
PMF1-201ENST00000368273 STAG2Q8N3U4 1231 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 CHST13Q8NET6 341 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 AGBL1Q96MI9 1066 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 ANP32EQ9BTT0 268 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 RANBP17Q9H2T7 1088 aaKnown RBP15.2■□□□□ 0.02
PMF1-201ENST00000368273 SLC5A4Q9NY91 659 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 FLRT1Q9NZU1 646 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 RBM27Q9P2N5 1060 aaKnown RBP15.2■□□□□ 0.02
PMF1-201ENST00000368273 FBXO40Q9UH90 709 aa15.2■□□□□ 0.02
PMF1-201ENST00000368273 V9GY48 417 aaPredicted RBP15.2■□□□□ 0.02
PMF1-201ENST00000368273 IGHA2P01877 340 aa15.19■□□□□ 0.02
PMF1-201ENST00000368273 GJB1P08034 283 aa15.19■□□□□ 0.02
PMF1-201ENST00000368273 EN2P19622 333 aaPredicted RBP15.19■□□□□ 0.02
PMF1-201ENST00000368273 SMARCA1P28370 1054 aa15.19■□□□□ 0.02
PMF1-201ENST00000368273 TKFCQ3LXA3 575 aa15.19■□□□□ 0.02
PMF1-201ENST00000368273 ASPRV1Q53RT3 343 aa15.19■□□□□ 0.02
PMF1-201ENST00000368273 OLFML2BQ68BL8 750 aa15.19■□□□□ 0.02
PMF1-201ENST00000368273 CCDC174Q6PII3 467 aa15.19■□□□□ 0.02
PMF1-201ENST00000368273 GJB4Q9NTQ9 266 aa15.19■□□□□ 0.02
PMF1-201ENST00000368273 RPTORQ8N122 1335 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 KLRF2D3W0D1 207 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 ICAM1P05362 532 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 PGK2P07205 417 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
PMF1-201ENST00000368273 DNM1Q05193 864 aaKnown RBP15.18■□□□□ 0.02
PMF1-201ENST00000368273 CACNB2Q08289 660 aaPredicted RBP15.18■□□□□ 0.02
PMF1-201ENST00000368273 SLC35G1Q2M3R5 365 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 ZNF792Q3KQV3 632 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 MFSD14CQ5VZR4 134 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 TMEM87AQ8NBN3 555 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 SPZ1Q9BXG8 430 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 UBA5Q9GZZ9 404 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.18■□□□□ 0.023e-7■■■■■ 42.1
PMF1-201ENST00000368273 HMX1Q9NP08 348 aaPredicted RBP15.18■□□□□ 0.02
PMF1-201ENST00000368273 PAK6Q9NQU5 681 aaPredicted RBP15.18■□□□□ 0.02
PMF1-201ENST00000368273 HOMER2Q9NSB8 354 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 LMBRD1Q9NUN5 540 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 CNPY2Q9Y2B0 182 aa15.18■□□□□ 0.02
PMF1-201ENST00000368273 ALAS1P13196 640 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 XBP1P17861 261 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 GJA8P48165 433 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 PFKFB3Q16875 520 aaPredicted RBP15.17■□□□□ 0.02
PMF1-201ENST00000368273 BRAPQ7Z569 592 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 U2AF1L4Q8WU68 220 aaKnown RBP15.17■□□□□ 0.02
PMF1-201ENST00000368273 MAML3Q96JK9 1138 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 TRERF1Q96PN7 1200 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 CPVLQ9H3G5 476 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 ACAD9Q9H845 621 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 RNF146Q9NTX7 359 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 PNMA2Q9UL42 364 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 CCPG1Q9ULG6 757 aa15.17■□□□□ 0.02
PMF1-201ENST00000368273 DIS3Q9Y2L1 958 aaKnown RBP15.17■□□□□ 0.02
PMF1-201ENST00000368273 DNAJC25-GNG10A0A024R161 153 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 hCG_1642624A0A1W2PR95 340 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 PRPF40AO75400 957 aaKnown RBP15.16■□□□□ 0.02
PMF1-201ENST00000368273 SGPL1O95470 568 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 MMP1P03956 469 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 SCG2P13521 617 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 NCLP19338 710 aaKnown RBP15.16■□□□□ 0.02
PMF1-201ENST00000368273 CYP2C19P33261 490 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 KRT85P78386 507 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 MLLT1Q03111 559 aaPredicted RBP15.16■□□□□ 0.02
PMF1-201ENST00000368273 CSPP1Q1MSJ5 1256 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 SKOR2Q2VWA4 1001 aaPredicted RBP15.16■□□□□ 0.02
PMF1-201ENST00000368273 ATL3Q6DD88 541 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 FAM173BQ6P4H8 233 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 ANKRD35Q8N283 1001 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 SHISA4Q96DD7 197 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 DEFB118Q96PH6 123 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 PLXNA1Q9UIW2 1896 aa15.16■□□□□ 0.02
PMF1-201ENST00000368273 KIF28PB7ZC32 967 aa15.15■□□□□ 0.02
PMF1-201ENST00000368273 CYTH3O43739 400 aa15.15■□□□□ 0.02
PMF1-201ENST00000368273 TRAK2O60296 914 aa15.15■□□□□ 0.02
PMF1-201ENST00000368273 CAPN2P17655 700 aa15.15■□□□□ 0.02
PMF1-201ENST00000368273 U2AF2P26368 475 aaKnown RBP eCLIP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms