RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 REXO2Q9Y3B8 237 aaKnown RBP13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 SPEF2Q9C093 1822 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 RNF40O75150 1001 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 PBX1P40424 430 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 CDK8P49336 464 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 SCNN1DP51172 638 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 KRT79Q5XKE5 535 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 ARL6IP4Q66PJ3 421 aaKnown RBP13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 FOXR1Q6PIV2 292 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 ELOA2Q8IYF1 753 aaPredicted RBP13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 MTA3Q9BTC8 594 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 FAM107BQ9H098 131 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 MAD2L2Q9UI95 211 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 SEMA3EO15041 775 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 HERVK_113P62684 666 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 MAP9Q49MG5 647 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 TRIM9Q9C026 710 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 ADAMTS7Q9UKP4 1686 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 DCCP43146 1447 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 FAM196BA6NMK8 535 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 CCNE1P24864 410 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 GTF2IP78347 998 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 RAPGEF1Q13905 1077 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 SF3B3Q15393 1217 aaKnown RBP13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 CNBD1Q8NA66 436 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 PAFAH1B1P43034 410 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 NOP2P46087 812 aaKnown RBP13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 SNAP25P60880 206 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 APBA1Q02410 837 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 DGKHQ86XP1 1220 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 DNAAF5Q86Y56 855 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 GLIS3Q8NEA6 775 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 ZNF287Q9HBT7 754 aa13.13□□□□□ -0.31
EFCAB13-201ENST00000331493 ATP8B1O43520 1251 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 TCP10Q12799 353 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 PROCA1Q8NCQ7 364 aaPredicted RBP13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 BARHL2Q9NY43 387 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 L1RE1Q9UN81 338 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 LAMB4A4D0S4 1761 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 STXBP3O00186 592 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 KCTD16Q68DU8 428 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 CNNM4Q6P4Q7 775 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 KRT25Q7Z3Z0 450 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 LCMT1Q9UIC8 334 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 PACSIN2Q9UNF0 486 aaPredicted RBP13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 MYH13Q9UKX3 1938 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 MYH10P35580 1976 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 ESYT3A0FGR9 886 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 WDR59Q6PJI9 974 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 C4AP0C0L4 1744 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 C4BP0C0L5 1744 aa13.12□□□□□ -0.31
EFCAB13-201ENST00000331493 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 EHBP1Q8NDI1 1231 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 TSG101Q99816 390 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 ZEB2O60315 1214 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 RASA1P20936 1047 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 GUCY2FP51841 1108 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 GSTO1P78417 241 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 HLTFQ14527 1009 aaKnown RBP eCLIP13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 GRM4Q14833 912 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 HERC4Q5GLZ8 1057 aaPredicted RBP13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 AFAP1L1Q8TED9 768 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 ALS2CR12Q96Q35 445 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 FAM53CQ9NYF3 392 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 CAPN11Q9UMQ6 739 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 NUP188Q5SRE5 1749 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 EPHB6O15197 1021 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 FTCDO95954 541 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 ACTN2P35609 894 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 ZBED6P86452 979 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 TTI2Q6NXR4 508 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 LRRC15Q8TF66 581 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 COG1Q8WTW3 980 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 HDAC7Q8WUI4 952 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 ARHGEF1Q92888 912 aaKnown RBP13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 DUSP9Q99956 384 aaKnown RBP13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 NDST4Q9H3R1 872 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 THAP9Q9H5L6 903 aa13.11□□□□□ -0.31
EFCAB13-201ENST00000331493 LRRC53A6NM62 1247 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 GGCXP38435 758 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 KIF11P52732 1056 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 CACNB3P54284 484 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 POLR2FP61218 127 aaKnown RBP13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 SLC35G1Q2M3R5 365 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms