RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 ALDH8A1Q9H2A2 487 aaPredicted RBP15.43■□□□□ 0.06
EPHB3-201ENST00000330394 KLHL14Q9P2G3 628 aa15.43■□□□□ 0.06
EPHB3-201ENST00000330394 PACSIN2Q9UNF0 486 aaPredicted RBP15.43■□□□□ 0.06
EPHB3-201ENST00000330394 ARHGEF40Q8TER5 1519 aa15.43■□□□□ 0.06
EPHB3-201ENST00000330394 ZNF609O15014 1411 aa15.43■□□□□ 0.06
EPHB3-201ENST00000330394 GLI2P10070 1586 aa15.43■□□□□ 0.06
EPHB3-201ENST00000330394 TSNAXIP1Q2TAA8 658 aa15.43■□□□□ 0.06
EPHB3-201ENST00000330394 MUM1L1Q5H9M0 696 aa15.43■□□□□ 0.06
EPHB3-201ENST00000330394 PTPN22Q9Y2R2 807 aa15.43■□□□□ 0.06
EPHB3-201ENST00000330394 KRT5P13647 590 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 GBP1P32455 592 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 GPBP1Q86WP2 473 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 SYCE1Q8N0S2 351 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 RNF10Q8N5U6 811 aaKnown RBP15.42■□□□□ 0.06
EPHB3-201ENST00000330394 FAM212AQ96EL1 285 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 LCMT1Q9UIC8 334 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.42■□□□□ 0.06
EPHB3-201ENST00000330394 SASH3O75995 380 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 CCNE1P24864 410 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 ATP5DP30049 168 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 RETREG2Q8NC44 543 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 NCAPGQ9BPX3 1015 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 NDST4Q9H3R1 872 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 PP2D1A8MPX8 630 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 PCCAP05165 728 aaPredicted RBP15.42■□□□□ 0.06
EPHB3-201ENST00000330394 NEK8Q86SG6 692 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 CADPS2Q86UW7 1296 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 VPS52Q8N1B4 723 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 GJA10Q969M2 543 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 DHTKD1Q96HY7 919 aaPredicted RBP15.42■□□□□ 0.06
EPHB3-201ENST00000330394 STRBPQ96SI9 672 aaKnown RBP15.42■□□□□ 0.06
EPHB3-201ENST00000330394 CHD1O14646 1710 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 MROH5Q6ZUA9 1318 aa15.42■□□□□ 0.06
EPHB3-201ENST00000330394 EXOC3O60645 756 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 PLCG1P19174 1290 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 ADCY7P51828 1080 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 RBM43Q6ZSC3 357 aaKnown RBP15.41■□□□□ 0.06
EPHB3-201ENST00000330394 TUBE1Q9UJT0 475 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 USTQ9Y2C2 406 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 SALL3Q9BXA9 1300 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 CCDC169A6NNP5 214 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 LGALS16A8MUM7 142 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 UBE2Q2LH0YL09 131 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 KRT14P02533 472 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 HHATQ5VTY9 493 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 USPL1Q5W0Q7 1092 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 STAG1Q8WVM7 1258 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 PLCB1Q9NQ66 1216 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 TMOD2Q9NZR1 351 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 CRB1P82279 1406 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 MLH3Q9UHC1 1453 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 BEND6Q5SZJ8 279 aaPredicted RBP15.41■□□□□ 0.06
EPHB3-201ENST00000330394 ELAC2Q9BQ52 826 aaKnown RBP15.41■□□□□ 0.06
EPHB3-201ENST00000330394 SENP2Q9HC62 589 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 CIAO1O76071 339 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 CYP2J2P51589 502 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 MAN2A1Q16706 1144 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 SEC31BQ9NQW1 1179 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 PCDHA12Q9UN75 941 aa15.41■□□□□ 0.06
EPHB3-201ENST00000330394 IRAK1P51617 712 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 COL9A3Q14050 684 aaPredicted RBP15.4■□□□□ 0.06
EPHB3-201ENST00000330394 MYCT1Q8N699 235 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 SPATA4Q8NEY3 305 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 MAGOHBQ96A72 148 aaKnown RBP15.4■□□□□ 0.06
EPHB3-201ENST00000330394 PANK4Q9NVE7 773 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 MUM1Q2TAK8 710 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 THOC1Q96FV9 657 aaKnown RBP15.4■□□□□ 0.06
EPHB3-201ENST00000330394 DNM3Q9UQ16 869 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 FRMPD2Q68DX3 1309 aaPredicted RBP15.4■□□□□ 0.06
EPHB3-201ENST00000330394 LAMC1P11047 1609 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 A0A1B0GTH6 734 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 FOXR1Q6PIV2 292 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 SYNCQ9H7C4 482 aa15.4■□□□□ 0.06
EPHB3-201ENST00000330394 PALMO75781 387 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 SEC24CP53992 1094 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 SP4Q02446 784 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 GFPT1Q06210 699 aaPredicted RBP15.39■□□□□ 0.05
EPHB3-201ENST00000330394 OTUD6AQ7L8S5 288 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 IQCDQ96DY2 449 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 OSBPL9Q96SU4 736 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 KANSL2Q9H9L4 492 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 DNAJC17Q9NVM6 304 aaKnown RBP15.39■□□□□ 0.05
EPHB3-201ENST00000330394 ADD3Q9UEY8 706 aaKnown RBP15.39■□□□□ 0.05
EPHB3-201ENST00000330394 TPX2Q9ULW0 747 aaKnown RBP15.39■□□□□ 0.05
EPHB3-201ENST00000330394 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 PGRMC1O00264 195 aaKnown RBP15.39■□□□□ 0.05
EPHB3-201ENST00000330394 IFNB1P01574 187 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 NR1I3Q14994 352 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 AP1ARQ63HQ0 302 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 PROCA1Q8NCQ7 364 aaPredicted RBP15.39■□□□□ 0.05
EPHB3-201ENST00000330394 LY9Q9HBG7 655 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 CYP4A11Q02928 519 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 RASGRF1Q13972 1273 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 DPH6Q7L8W6 267 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 TBK1Q9UHD2 729 aa15.39■□□□□ 0.05
EPHB3-201ENST00000330394 USP42Q9H9J4 1324 aaKnown RBP15.38■□□□□ 0.05
EPHB3-201ENST00000330394 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
EPHB3-201ENST00000330394 GYPCP04921 128 aa15.38■□□□□ 0.05
EPHB3-201ENST00000330394 EXOC3L4Q17RC7 722 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms