RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MYH7BA7E2Y1 1941 aa16.43■□□□□ 0.22
SSBP1-201ENST00000265304 TAL1P17542 331 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-201ENST00000265304 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
SSBP1-201ENST00000265304 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
SSBP1-201ENST00000265304 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 KCTD2Q14681 263 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 ZNF792Q3KQV3 632 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 ZNF467Q7Z7K2 595 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-201ENST00000265304 FBXO18Q8NFZ0 1043 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 MORC4Q8TE76 937 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 PIBF1Q8WXW3 757 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 TBC1D5Q92609 795 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 AIFM3Q96NN9 605 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 ARHGAP39Q9C0H5 1083 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 PSTPIP2Q9H939 334 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 PRDM10Q9NQV6 1147 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 SRRDQ9UH36 339 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 KIF3AQ9Y496 699 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 FRMPD4Q14CM0 1322 aa16.42■□□□□ 0.22
SSBP1-201ENST00000265304 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 TNPO2O14787 897 aaKnown RBP16.41■□□□□ 0.22
SSBP1-201ENST00000265304 COBLO75128 1261 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 PPFIA3O75145 1194 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
SSBP1-201ENST00000265304 CALML3P27482 149 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 HOXD10P28358 340 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 ADORA2AP29274 412 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 GNA11P29992 359 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 NAPAP54920 295 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 BECN1Q14457 450 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 RNF207Q6ZRF8 634 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 MSL3Q8N5Y2 521 aaKnown RBP16.41■□□□□ 0.22
SSBP1-201ENST00000265304 DNERQ8NFT8 737 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 CD99L2Q8TCZ2 262 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 SYTL5Q8TDW5 730 aaPredicted RBP16.41■□□□□ 0.22
SSBP1-201ENST00000265304 FGD4Q96M96 766 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 MMP19Q99542 508 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 TSKSQ9UJT2 592 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 IVNS1ABPQ9Y6Y0 642 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 KIAA1217Q5T5P2 1943 aa16.41■□□□□ 0.22
SSBP1-201ENST00000265304 GCOM1H8Y6P7 765 aaPredicted RBP16.4■□□□□ 0.22
SSBP1-201ENST00000265304 POLR2MP0CAP2 368 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 XBP1P17861 261 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 GJB2P29033 226 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 BAATQ14032 418 aaPredicted RBP16.4■□□□□ 0.22
SSBP1-201ENST00000265304 MAMDC4Q6UXC1 1216 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
SSBP1-201ENST00000265304 ANKRD35Q8N283 1001 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 BICD2Q8TD16 824 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 CRYGNQ8WXF5 182 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 CUL5Q93034 780 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 NUDT12Q9BQG2 462 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 C6orf50Q9HD87 102 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 VPS54Q9P1Q0 977 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 COL20A1Q9P218 1284 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 PCDHA4Q9UN74 947 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 SMC3Q9UQE7 1217 aa16.4■□□□□ 0.22
SSBP1-201ENST00000265304 HTTP42858 3142 aa16.39■□□□□ 0.21
SSBP1-201ENST00000265304 FOSP01100 380 aaPredicted RBP16.39■□□□□ 0.21
SSBP1-201ENST00000265304 MMP1P03956 469 aa16.39■□□□□ 0.21
SSBP1-201ENST00000265304 EDNRBP24530 442 aa16.39■□□□□ 0.21
SSBP1-201ENST00000265304 OLFML2BQ68BL8 750 aa16.39■□□□□ 0.21
SSBP1-201ENST00000265304 OTOP1Q7RTM1 612 aa16.39■□□□□ 0.21
SSBP1-201ENST00000265304 RBM19Q9Y4C8 960 aaKnown RBP16.39■□□□□ 0.21
SSBP1-201ENST00000265304 ASTN1O14525 1302 aa16.39■□□□□ 0.21
SSBP1-201ENST00000265304 RPTORQ8N122 1335 aa16.39■□□□□ 0.21
SSBP1-201ENST00000265304 SOWAHBA6NEL2 793 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 POTEB2H3BUK9 544 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 DTNBO60941 627 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 PDCP20941 246 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 RGS2P41220 211 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 FLT3LGP49771 235 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 ADCY7P51828 1080 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 LBX1P52954 281 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 AP3B2Q13367 1082 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 KRT40Q6A162 431 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 NSMFQ6X4W1 530 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 SLC30A10Q6XR72 485 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 TRMT44Q8IYL2 757 aaKnown RBP16.38■□□□□ 0.21
SSBP1-201ENST00000265304 PXYLP1Q8TE99 480 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 TNFRSF25Q93038 417 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 CWC22Q9HCG8 908 aaKnown RBP16.38■□□□□ 0.21
SSBP1-201ENST00000265304 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 SLC5A4Q9NY91 659 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 LRRC37A2A6NM11 1700 aa16.38■□□□□ 0.21
SSBP1-201ENST00000265304 ADAMTS3O15072 1205 aa16.37■□□□□ 0.21
SSBP1-201ENST00000265304 CFBP00751 764 aa16.37■□□□□ 0.21
SSBP1-201ENST00000265304 U2AF2P26368 475 aaKnown RBP eCLIP16.37■□□□□ 0.211e-7■■■■■ 34.9
SSBP1-201ENST00000265304 CNTN2Q02246 1040 aa16.37■□□□□ 0.21
SSBP1-201ENST00000265304 BLIDQ8IZY5 108 aa16.37■□□□□ 0.21
SSBP1-201ENST00000265304 FAM184AQ8NB25 1140 aa16.37■□□□□ 0.21
SSBP1-201ENST00000265304 MAML3Q96JK9 1138 aa16.37■□□□□ 0.21
SSBP1-201ENST00000265304 C8orf76Q96K31 380 aa16.37■□□□□ 0.21
SSBP1-201ENST00000265304 IWS1Q96ST2 819 aa16.37■□□□□ 0.21
SSBP1-201ENST00000265304 APBA2Q99767 749 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms