RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Vmn1r209Q5NC97 312 aa23.71■■□□□ 1.39
Trim27-207ENSMUST00000223065 CtcfQ61164 736 aaKnown RBP23.71■■□□□ 1.39
Trim27-207ENSMUST00000223065 Ptger2Q62053 362 aa23.71■■□□□ 1.39
Trim27-207ENSMUST00000223065 Sdccag8Q80UF4 717 aa23.71■■□□□ 1.39
Trim27-207ENSMUST00000223065 Ifih1Q8R5F7 1025 aa23.71■■□□□ 1.39
Trim27-207ENSMUST00000223065 Rhobtb3Q9CTN4 611 aa23.71■■□□□ 1.39
Trim27-207ENSMUST00000223065 Borcs6Q9D6W8 360 aa23.71■■□□□ 1.39
Trim27-207ENSMUST00000223065 Eid1Q9DCR4 169 aa23.71■■□□□ 1.39
Trim27-207ENSMUST00000223065 Olfr247E9PVJ7 320 aa23.7■■□□□ 1.38
Trim27-207ENSMUST00000223065 Olfr819K7N727 320 aa23.7■■□□□ 1.38
Trim27-207ENSMUST00000223065 Fbln1Q08879 705 aa23.7■■□□□ 1.38
Trim27-207ENSMUST00000223065 Gxylt1Q3UHH8 404 aa23.7■■□□□ 1.38
Trim27-207ENSMUST00000223065 Prpf40bQ80W14 870 aa23.7■■□□□ 1.38
Trim27-207ENSMUST00000223065 Lmbrd1Q8K0B2 537 aa23.7■■□□□ 1.38
Trim27-207ENSMUST00000223065 Ciapin1Q8WTY4 309 aa23.7■■□□□ 1.38
Trim27-207ENSMUST00000223065 Slc5a5Q99PN0 618 aa23.7■■□□□ 1.38
Trim27-207ENSMUST00000223065 GabreA2AMW3 916 aa23.69■■□□□ 1.38
Trim27-207ENSMUST00000223065 Nap1l4Q78ZA7 375 aaKnown RBP23.69■■□□□ 1.38
Trim27-207ENSMUST00000223065 Gmcl1Q920G9 524 aa23.69■■□□□ 1.38
Trim27-207ENSMUST00000223065 Vps33aQ9D2N9 598 aa23.69■■□□□ 1.38
Trim27-207ENSMUST00000223065 AdnpQ9Z103 1108 aaKnown RBP23.69■■□□□ 1.38
Trim27-207ENSMUST00000223065 Rab3il1Q8VDV3 383 aa23.69■■□□□ 1.38
Trim27-207ENSMUST00000223065 DmtnQ9WV69 405 aa23.69■■□□□ 1.38
Trim27-207ENSMUST00000223065 Gm5737A0A140LI11 423 aa23.68■■□□□ 1.38
Trim27-207ENSMUST00000223065 Dync1i1O88485 628 aa23.68■■□□□ 1.38
Trim27-207ENSMUST00000223065 EporP14753 507 aa23.68■■□□□ 1.38
Trim27-207ENSMUST00000223065 ErfeQ6PGN1 340 aa23.68■■□□□ 1.38
Trim27-207ENSMUST00000223065 Ercc6lQ8BHK9 1240 aa23.68■■□□□ 1.38
Trim27-207ENSMUST00000223065 Gpr150Q8BL07 427 aa23.68■■□□□ 1.38
Trim27-207ENSMUST00000223065 Oxnad1Q8VE38 311 aa23.68■■□□□ 1.38
Trim27-207ENSMUST00000223065 Tube1Q9D6T1 475 aa23.68■■□□□ 1.38
Trim27-207ENSMUST00000223065 Tacc2Q9JJG0 1149 aa23.68■■□□□ 1.38
Trim27-207ENSMUST00000223065 Dnaaf5B9EJR8 853 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Setd4P58467 439 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Gng11P61953 73 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Taf3Q5HZG4 932 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 MslnlQ8C160 685 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Depdc1aQ8CIG0 804 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 En2P09066 324 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Meis2P97367 477 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Slc9a2Q3ZAS0 814 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Trpc6Q61143 930 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Mrps31Q61733 384 aaKnown RBP23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Igdcc3Q8BQC3 813 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Kremen1Q99N43 473 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Saal1Q9D2C2 474 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Egfl6Q9JJZ5 550 aa23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Zswim8Q3UHH1 1832 aaKnown RBP23.67■■□□□ 1.38
Trim27-207ENSMUST00000223065 Gm10378F6XQQ1 160 aa23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 Pip4k2aO70172 405 aa23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 Tshz1Q5DTH5 1084 aa23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 Klhl10Q9D5V2 608 aa23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 Serpinb12Q9D7P9 423 aa23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 OatP29758 439 aa23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 Dnm2P39054 870 aaKnown RBP23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 Lrrc55Q3UY51 311 aa23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 Swap70Q6A028 585 aaKnown RBP23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 Azi2Q9QYP6 405 aa23.66■■□□□ 1.38
Trim27-207ENSMUST00000223065 Tpp1O89023 562 aa23.65■■□□□ 1.38
Trim27-207ENSMUST00000223065 Paxbp1P58501 919 aa23.65■■□□□ 1.38
Trim27-207ENSMUST00000223065 Snap25P60879 206 aa23.65■■□□□ 1.38
Trim27-207ENSMUST00000223065 Mkrn1Q9QXP6 481 aa23.65■■□□□ 1.38
Trim27-207ENSMUST00000223065 Ifi202Q9R002 445 aa23.65■■□□□ 1.38
Trim27-207ENSMUST00000223065 Prkab1Q9R078 270 aa23.65■■□□□ 1.38
Trim27-207ENSMUST00000223065 Frmpd3A0A140LIW3 1774 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 Itgb4A2A863 1818 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 Dock2Q8C3J5 1828 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 Olfr832Q7TRG9 312 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 Cep95Q8BVV7 827 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 Ccdc14Q8K2J4 934 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 CutaQ9CQ89 177 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 Apopt1Q9CQW7 192 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 PfasQ5SUR0 1337 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 SynrgQ5SV85 1306 aa23.64■■□□□ 1.38
Trim27-207ENSMUST00000223065 Man1a2P39098 641 aa23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Nedd4P46935 887 aaKnown RBP23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Sema3eP70275 775 aa23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Jade2Q6ZQF7 829 aa23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Fbxo11Q7TPD1 930 aaKnown RBP23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Cracr2bQ80ZJ8 394 aa23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Cyp4f39Q8BGU0 532 aa23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Cd248Q91V98 765 aa23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Bhmt2Q91WS4 363 aa23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Trex1Q91XB0 314 aa23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Vav3Q9R0C8 847 aa23.64■■□□□ 1.37
Trim27-207ENSMUST00000223065 Gm7168A0AUV4 508 aa23.63■■□□□ 1.37
Trim27-207ENSMUST00000223065 Scgb2b19J3QM75 112 aa23.63■■□□□ 1.37
Trim27-207ENSMUST00000223065 Jakmip3Q5DTN8 844 aa23.63■■□□□ 1.37
Trim27-207ENSMUST00000223065 Dnph1Q80VJ3 173 aa23.63■■□□□ 1.37
Trim27-207ENSMUST00000223065 Thap3Q8BJ25 218 aa23.63■■□□□ 1.37
Trim27-207ENSMUST00000223065 Plcg2Q8CIH5 1265 aa23.63■■□□□ 1.37
Trim27-207ENSMUST00000223065 Phldb2Q8K1N2 1249 aa23.63■■□□□ 1.37
Trim27-207ENSMUST00000223065 Vps18Q8R307 973 aa23.63■■□□□ 1.37
Trim27-207ENSMUST00000223065 Rfpl4bJ3QPR6 266 aa23.62■■□□□ 1.37
Trim27-207ENSMUST00000223065 Pcdha4O88689 947 aa23.62■■□□□ 1.37
Trim27-207ENSMUST00000223065 Mpp3O88910 568 aa23.62■■□□□ 1.37
Trim27-207ENSMUST00000223065 AgtP11859 477 aa23.62■■□□□ 1.37
Trim27-207ENSMUST00000223065 Hmgb1P63158 215 aaKnown RBP23.62■■□□□ 1.37
Trim27-207ENSMUST00000223065 Fam76aQ922G2 307 aa23.62■■□□□ 1.37
Trim27-207ENSMUST00000223065 ChmQ9QXG2 665 aa23.62■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms