RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Swap70Q6A028 585 aaKnown RBP12.4□□□□□ -0.42
Trim9-202ENSMUST00000110522 Coa7Q921H9 231 aa12.4□□□□□ -0.42
Trim9-202ENSMUST00000110522 CoasyQ9DBL7 563 aa12.4□□□□□ -0.42
Trim9-202ENSMUST00000110522 Crb1Q8VHS2 1405 aa12.4□□□□□ -0.42
Trim9-202ENSMUST00000110522 Rasal2E9PW37 1286 aa12.4□□□□□ -0.42
Trim9-202ENSMUST00000110522 Il17raQ60943 864 aa12.4□□□□□ -0.42
Trim9-202ENSMUST00000110522 Kcnf1Q7TSH7 493 aa12.4□□□□□ -0.42
Trim9-202ENSMUST00000110522 Ints4Q8CIM8 964 aa12.4□□□□□ -0.42
Trim9-202ENSMUST00000110522 Dnajc21E9Q8D0 531 aa12.4□□□□□ -0.43
Trim9-202ENSMUST00000110522 Tph1P17532 447 aa12.4□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ccna1Q61456 421 aa12.4□□□□□ -0.43
Trim9-202ENSMUST00000110522 SnrkQ8VDU5 748 aa12.4□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ddx39aQ8VDW0 427 aaKnown RBP12.4□□□□□ -0.43
Trim9-202ENSMUST00000110522 Apol6B7ZC55 329 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Pik3caP42337 1068 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 AdkP55264 361 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Specc1Q5SXY1 1067 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ncoa7Q6DFV7 943 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Arfgap2Q99K28 520 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Apopt1Q9CQW7 192 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Bcl2l12Q9D3J3 255 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Gm45194A0A140LJG2 572 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Zfp408H7BX78 710 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Axin2O88566 840 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Tspyl1O88852 379 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ftl1P29391 183 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ckap2Q3V1H1 664 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Tubb2aQ7TMM9 445 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Bola2Q8BGS2 86 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Skor1Q8BX46 964 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Slc44a4Q91VA1 707 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 BaatQ91X34 420 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Tubb2bQ9CWF2 445 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Fsip1Q9D3V5 435 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Cd2apQ9JLQ0 637 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Gm7168A0AUV4 508 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Dnaaf5B9EJR8 853 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Gm3893E9Q1I1 302 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Nck2O55033 380 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Npy5rO70342 466 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Cdr2P97817 455 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Nom1Q3UFM5 854 aaKnown RBP12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Lamc2Q61092 1191 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Cdc23Q8BGZ4 597 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Fam161bQ8CB59 589 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Bicdl2Q8CHW5 507 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Cst12Q9DAN8 128 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 FibpQ9JI19 357 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Sgpp1Q9JI99 430 aa12.39□□□□□ -0.43
Trim9-202ENSMUST00000110522 Cdc37Q61081 379 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Spata4Q8K3V1 295 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Creb3l3Q91XE9 479 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Myo3bQ1EG27 1305 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Mdc1Q5PSV9 1707 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Slurp2P0DP59 97 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Tnni3P48787 211 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Vps52Q8C754 723 aaKnown RBP12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Prpf6Q91YR7 941 aaKnown RBP12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Tex21Q9R0U9 575 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 1700003F12RikA2AKE5 210 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 GssP51855 474 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ms4a5Q810P8 197 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Fam228aQ8CDW1 299 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Eef1gQ9D8N0 437 aaKnown RBP12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Arhgef10lA2AWP8 1280 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Gm10134F6ZQC6 126 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Krt13P08730 437 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Epha2Q03145 977 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Carmil2Q3V3V9 1296 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ctnna3Q65CL1 895 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Naa35Q6PHQ8 725 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ccdc169Q8BXX9 214 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Znf830Q8R1N0 363 aaKnown RBP12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Q91WD4 421 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ndst4Q9EQW8 872 aa12.38□□□□□ -0.43
Trim9-202ENSMUST00000110522 Mageb2A2AHM0 380 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Sema6bO54951 886 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Aimp1P31230 310 aaKnown RBP12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Slc2a13Q3UHK1 637 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ddx41Q91VN6 622 aaKnown RBP12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Mad2l2Q9D752 211 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Arl6ip4Q9JM93 229 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Chd4Q6PDQ2 1915 aaKnown RBP12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Zfp174B9EJW5 407 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Myo1aO88329 1043 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Nedd4P46935 887 aaKnown RBP12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Kmt5aQ2YDW7 349 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Ric8aQ3TIR3 530 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Vmn1r209Q5NC97 312 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Znf532Q6NXK2 1036 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Fbxo18Q8K2I9 1042 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Mfap3lQ9D3X9 409 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Sf3a3Q9D554 501 aaKnown RBP12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Sdr42e1Q9D665 394 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Rcan1Q9JHG6 198 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Krt19P19001 403 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Rpusd2Q149F1 553 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Eif3j2Q66JS6 263 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Kif13aQ9EQW7 1749 aa12.37□□□□□ -0.43
Trim9-202ENSMUST00000110522 Anks6Q6GQX6 883 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms