RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Uap1Q91YN5 522 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Gm5580A0A0N4SVP8 411 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Palm3A2TJV2 734 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Clrn2B2RVW2 232 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Tpp1O89023 562 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Psmb7P70195 277 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Klrg2Q3UM83 387 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ccdc38Q8CDN8 563 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ano2Q8CFW1 1002 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Gimap7Q8R379 293 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Fam217aQ9D9W6 419 aa20.44■□□□□ 0.86
Trim47-202ENSMUST00000106441 Gm36210A0A1B0GS00 229 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 A0A1W2P6Q8 802 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Gm9048A0A1W2P7H4 802 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 A0A1W2P7Z8 802 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Gm9046A0A1W2P855 802 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Exoc3l2D3YUP5 789 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Dnm2P39054 870 aaKnown RBP20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Gjb4Q02738 266 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Psen2Q61144 448 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Atp1a2Q6PIE5 1020 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Dusp9Q7TNL7 452 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Nup133Q8R0G9 1155 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Stap2Q8R0L1 411 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Cdk8Q8R3L8 464 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ndufv1Q91YT0 464 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 Apobec3Q99J72 440 aaKnown RBP20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 AmfrQ9R049 643 aa20.43■□□□□ 0.86
Trim47-202ENSMUST00000106441 SisF8VQM5 1818 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Tex13cD3YU32 604 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Krt86P97861 486 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 GypcQ78HU7 95 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Q8C1R3 189 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Krt222Q8CCX5 294 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Nol7Q9D7Z3 254 aaKnown RBP20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Chaf1aQ9QWF0 911 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Gpaa1Q9WTK3 621 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 ItgadQ3V0T4 1168 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Mars2Q499X9 586 aaKnown RBP20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Hpcal4Q8BGZ1 191 aa20.42■□□□□ 0.86
Trim47-202ENSMUST00000106441 Abcd1P48410 736 aa20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Igbp1Q61249 340 aa20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ccdc73Q8CDM4 1066 aa20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Eps8l1Q8R5F8 716 aa20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Nova2D3YVV7 556 aaKnown RBP20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Kcnb1Q03717 857 aa20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Adgre1Q61549 931 aa20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Sez6lQ6P1D5 963 aa20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Nek5Q7TSC3 627 aa20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Epn1Q80VP1 575 aa20.41■□□□□ 0.86
Trim47-202ENSMUST00000106441 Herc3A6H6S0 1050 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 MthfslL7N466 203 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 ByslO54825 436 aaKnown RBP20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Pip4k2aO70172 405 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ncf1Q09014 390 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Q3UJP5 209 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Lgr6Q3UVD5 967 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Tshz2Q68FE9 1030 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Cnnm4Q69ZF7 771 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ccdc57Q6PHN1 1016 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Spata4Q8K3V1 295 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Q91WD4 421 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Sh2b1Q91ZM2 756 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Prc1Q99K43 603 aaKnown RBP20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ccdc83Q9D4V3 305 aa20.4■□□□□ 0.86
Trim47-202ENSMUST00000106441 Gucy1a2F8VQK3 730 aa20.39■□□□□ 0.86
Trim47-202ENSMUST00000106441 Stim1P70302 685 aa20.39■□□□□ 0.86
Trim47-202ENSMUST00000106441 1700013D24RikQ0P521 120 aa20.39■□□□□ 0.86
Trim47-202ENSMUST00000106441 LrmpQ60664 539 aa20.39■□□□□ 0.86
Trim47-202ENSMUST00000106441 Scnn1aQ61180 699 aa20.39■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ccdc122Q8BVN0 290 aa20.39■□□□□ 0.86
Trim47-202ENSMUST00000106441 Ubxn8Q9QZ49 277 aa20.39■□□□□ 0.86
Trim47-202ENSMUST00000106441 Cacna1fQ9JIS7 1985 aa20.39■□□□□ 0.85
Trim47-202ENSMUST00000106441 Nkx2-5P42582 318 aa20.39■□□□□ 0.85
Trim47-202ENSMUST00000106441 Ttll12Q3UDE2 639 aa20.39■□□□□ 0.85
Trim47-202ENSMUST00000106441 MmeQ61391 750 aa20.39■□□□□ 0.85
Trim47-202ENSMUST00000106441 Pspc1Q8R326 523 aaKnown RBP20.39■□□□□ 0.85
Trim47-202ENSMUST00000106441 Wdr64Q9D565 1086 aa20.39■□□□□ 0.85
Trim47-202ENSMUST00000106441 Dnajc7Q9QYI3 494 aa20.39■□□□□ 0.85
Trim47-202ENSMUST00000106441 Gm5134E9QAB5 671 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Myl3P09542 204 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Eya3P97480 510 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Fam196bQ6GQV1 535 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Ccp110Q7TSH4 1004 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Dclk3Q8BWQ5 790 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Apopt1Q9CQW7 192 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Mss51Q9D5Z5 446 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Znf287Q9EQB9 759 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Pdcd6ipQ9WU78 869 aaKnown RBP20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Zfp853A0A1D5RM95 733 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Gm10378F6XQQ1 160 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 LbrQ3U9G9 626 aaKnown RBP20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Tmprss11eQ5S248 423 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Pabpc4Q6PHQ9 660 aaKnown RBP20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Tmem63cQ8CBX0 802 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Tmem60Q8K174 133 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Syce1Q9D495 329 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Col2a1P28481 1487 aa20.38■□□□□ 0.85
Trim47-202ENSMUST00000106441 Pcdh11xF6ZNL5 1338 aa20.37■□□□□ 0.85
Trim47-202ENSMUST00000106441 Gm5934D3Z4U6 212 aa20.37■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms