RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Acad12D3Z7X0 555 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Myo1gQ5SUA5 1024 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Acbd5Q5XG73 508 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Mettl5Q8K1A0 209 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Nod2Q8K3Z0 1020 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Xab2Q9DCD2 855 aaKnown RBP11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Foxo3Q9WVH4 672 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Tnip3A0A1D5RMN0 279 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Kcnd1Q03719 651 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Wdr70Q3TWF6 657 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Vipas39Q8BGQ1 491 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ppp4r1Q8K2V1 951 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ehd4Q9EQP2 541 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ccnt1Q9QWV9 724 aaKnown RBP11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Arhgap30Q640N3 1101 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ssfa2Q922B9 1252 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Zfyve19Q9DAZ9 389 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Nek3Q9R0A5 511 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ap1b1O35643 943 aaKnown RBP11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Enc1O35709 589 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Sema3fO88632 785 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Casp8O89110 480 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ctdnep1Q3TP92 244 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Prc1Q99K43 603 aaKnown RBP11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Klc4Q9DBS5 619 aa11.79□□□□□ -0.52
Ciita-201ENSMUST00000023147 Qser1A2BIE1 1698 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ptpn14Q62130 1189 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ctdspl2Q8BG15 465 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Trerf1Q8BXJ2 1205 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Basp1Q91XV3 226 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Polr3cQ9D483 533 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Zcchc17Q9ESX4 241 aaKnown RBP11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Bnip3lQ9Z2F7 218 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 TnrQ8BYI9 1358 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Akap5D3YVF0 745 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 CaluO35887 315 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Mier3Q3UHF3 551 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Apol7eQ3UZ24 369 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Haus6Q6NV99 933 aaKnown RBP11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Tor4aQ8BH02 426 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Kctd6Q8BNL5 237 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Phf20l1Q8CCJ9 1013 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Rrp1bQ91YK2 724 aaKnown RBP11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Pde6cQ91ZQ1 861 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Grin2dQ03391 1323 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Cps1Q8C196 1500 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ccdc153P0C7Q1 202 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Exosc10P56960 887 aaKnown RBP11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 RubcnlQ3TD16 648 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Trmt10cQ3UFY8 414 aaKnown RBP11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Tmed1Q3V009 227 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Palm2Q8BR92 376 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Trim52Q8CDV4 233 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Rbm43Q99J64 343 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Fmnl1Q9JL26 1094 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Cul4bA2A432 970 aaKnown RBP11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 SelenovD3YXG1 328 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Pcdhb9E9Q5G2 828 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Lipo1J3QME6 396 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 NxnP97346 435 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Wdr44Q6NVE8 915 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Klhl7Q8BUL5 586 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Slc35g1Q8BY79 368 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Tspyl4Q8VD63 406 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Cdc26Q99JP4 85 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Myl7Q9QVP4 175 aa11.78□□□□□ -0.52
Ciita-201ENSMUST00000023147 Timm44O35857 452 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Arhgap6O54834 987 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 DeptorQ570Y9 409 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Gm5169Q5M8P2 212 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Fkbp3Q62446 224 aaKnown RBP11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Krt12Q64291 487 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ankrd6Q69ZU8 712 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Anks6Q6GQX6 883 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Riox2Q8CD15 465 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ube2q2Q8K2Z8 378 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ttc4Q8R3H9 386 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 RpainQ9CWY9 219 aa11.77□□□□□ -0.52
Ciita-201ENSMUST00000023147 Gm6121L7MUF1 212 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ap5z1Q3U829 807 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pabpc4Q6PHQ9 660 aaKnown RBP11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Kat14Q8CID0 779 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pacsin2Q9WVE8 486 aaKnown RBP11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 AceP09470 1312 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ccng2O08918 344 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Aggf1Q7TN31 711 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Mettl24Q8CCB5 363 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cabp7Q91ZM8 215 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gja8P28236 440 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gm14685Q52KH6 695 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Tpd52Q62393 224 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Spata32Q8C5V0 334 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Apopt1Q9CQW7 192 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gm11983V9GXS8 105 aa11.77□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gm5580A0A0N4SVP8 411 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pde6aP27664 859 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Itih3Q61704 889 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pcdhb14Q6PB90 796 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ppme1Q8BVQ5 386 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cabcoco1Q8CDT7 208 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms