RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 YMR102CQ03177 834 aa-0.44□□□□□ -2.48
snR38snR38 BNA5Q05979 453 aa-0.44□□□□□ -2.48
snR38snR38 NDE2Q07500 545 aa-0.44□□□□□ -2.48
snR38snR38 YLR001CQ07895 862 aa-0.44□□□□□ -2.48
snR38snR38 DNL4Q08387 944 aaPredicted RBP-0.44□□□□□ -2.48
snR38snR38 ADH1P00330 348 aaKnown RBP-0.45□□□□□ -2.48
snR38snR38 COX4P04037 155 aa-0.45□□□□□ -2.48
snR38snR38 SPE2P21182 396 aa-0.45□□□□□ -2.48
snR38snR38 YSP3P25036 478 aa-0.45□□□□□ -2.48
snR38snR38 SPS22P25380 463 aa-0.45□□□□□ -2.48
snR38snR38 SMY1P32364 656 aaKnown RBP-0.45□□□□□ -2.48
snR38snR38 GCD7P32502 381 aaPredicted RBP-0.45□□□□□ -2.48
snR38snR38 UME6P39001 836 aa-0.45□□□□□ -2.48
snR38snR38 ECM10P39987 644 aa-0.45□□□□□ -2.48
snR38snR38 NCA3P46955 337 aa-0.45□□□□□ -2.48
snR38snR38 GWT1P47026 490 aa-0.45□□□□□ -2.48
snR38snR38 IST1P53843 298 aaPredicted RBP-0.45□□□□□ -2.48
snR38snR38 YNL193WP53870 558 aa-0.45□□□□□ -2.48
snR38snR38 SLG1P54867 378 aa-0.45□□□□□ -2.48
snR38snR38 SSP2Q08646 371 aa-0.45□□□□□ -2.48
snR38snR38 YTM1Q12024 460 aaPredicted RBP-0.45□□□□□ -2.48
snR38snR38 LSP1Q12230 341 aaKnown RBP-0.45□□□□□ -2.48
snR38snR38 RRD2Q12461 358 aa-0.45□□□□□ -2.48
snR38snR38 SRP54P20424 541 aaKnown RBP-0.46□□□□□ -2.48
snR38snR38 SIR1P21691 654 aa-0.46□□□□□ -2.48
snR38snR38 LCB1P25045 558 aaKnown RBP-0.46□□□□□ -2.48
snR38snR38 MKK1P32490 508 aa-0.46□□□□□ -2.48
snR38snR38 ZUO1P32527 433 aaKnown RBP-0.46□□□□□ -2.48
snR38snR38 FRE1P32791 686 aa-0.46□□□□□ -2.48
snR38snR38 PFF1P38244 976 aa-0.46□□□□□ -2.48
snR38snR38 IFA38P38286 347 aa-0.46□□□□□ -2.48
snR38snR38 YPS5P53057 165 aa-0.46□□□□□ -2.48
snR38snR38 YGR018CP53211 109 aa-0.46□□□□□ -2.48
snR38snR38 RSM28Q03430 361 aa-0.46□□□□□ -2.48
snR38snR38 DBP10Q12389 995 aaKnown RBP-0.46□□□□□ -2.48
snR38snR38 TY2A-LR1P0C2J4 438 aa-0.47□□□□□ -2.48
snR38snR38 RPS8AP0CX39 200 aaKnown RBP-0.47□□□□□ -2.48
snR38snR38 RPS8BP0CX40 200 aaKnown RBP-0.47□□□□□ -2.48
snR38snR38 TY2A-FP0CX61 438 aa-0.47□□□□□ -2.48
snR38snR38 TY2A-GR2P0CX62 438 aa-0.47□□□□□ -2.48
snR38snR38 ATP12P22135 325 aa-0.47□□□□□ -2.48
snR38snR38 TY2A-CP25383 438 aa-0.47□□□□□ -2.48
snR38snR38 THI4P32318 326 aa-0.47□□□□□ -2.48
snR38snR38 AGA2P32781 87 aa-0.47□□□□□ -2.48
snR38snR38 TIM23P32897 222 aa-0.47□□□□□ -2.48
snR38snR38 TFC3P34111 1160 aa-0.47□□□□□ -2.48
snR38snR38 YKL050CP35736 922 aa-0.47□□□□□ -2.48
snR38snR38 YLF2P38746 405 aa-0.47□□□□□ -2.48
snR38snR38 MIG3P39943 394 aa-0.47□□□□□ -2.48
snR38snR38 YFR020WP43600 232 aa-0.47□□□□□ -2.48
snR38snR38 SCD6P45978 349 aaKnown RBP RIP-Chip data-0.47□□□□□ -2.48not detected
snR38snR38 CTF18P49956 741 aa-0.47□□□□□ -2.48
snR38snR38 TY2A-DR2Q03483 438 aa-0.47□□□□□ -2.48
snR38snR38 POB3Q04636 552 aaKnown RBP-0.47□□□□□ -2.48
snR38snR38 ECM38Q05902 660 aaPredicted RBP-0.47□□□□□ -2.48
snR38snR38 ADE13Q05911 482 aaKnown RBP-0.47□□□□□ -2.48
snR38snR38 LIP2Q06005 328 aa-0.47□□□□□ -2.48
snR38snR38 YPR027CQ12079 277 aa-0.47□□□□□ -2.48
snR38snR38 TY2A-BQ12260 438 aa-0.47□□□□□ -2.48
snR38snR38 TY2A-OR2Q12293 438 aa-0.47□□□□□ -2.48
snR38snR38 TY2A-DR1Q12392 438 aa-0.47□□□□□ -2.48
snR38snR38 TY2A-OR1Q12439 438 aa-0.47□□□□□ -2.48
snR38snR38 TY2A-DR3Q99303 438 aa-0.47□□□□□ -2.48
snR38snR38 HXK2P04807 486 aaKnown RBP-0.48□□□□□ -2.49
snR38snR38 ARG81P05085 880 aa-0.48□□□□□ -2.49
snR38snR38 LEU4P06208 619 aaKnown RBP-0.48□□□□□ -2.49
snR38snR38 YCR007CP25354 239 aa-0.48□□□□□ -2.49
snR38snR38 POP5P28005 173 aa-0.48□□□□□ -2.49
snR38snR38 ARP2P32381 391 aaKnown RBP-0.48□□□□□ -2.49
snR38snR38 AST1P35183 429 aa-0.48□□□□□ -2.49
snR38snR38 NTR2P36118 322 aaPredicted RBP-0.48□□□□□ -2.49
snR38snR38 GPI18P38211 433 aa-0.48□□□□□ -2.49
snR38snR38 PKP1P40530 394 aa-0.48□□□□□ -2.49
snR38snR38 MNN5P46982 586 aa-0.48□□□□□ -2.49
snR38snR38 PMT3P47190 753 aa-0.48□□□□□ -2.49
snR38snR38 NUP57P48837 541 aa-0.48□□□□□ -2.49
snR38snR38 YGL262WP53054 175 aa-0.48□□□□□ -2.49
snR38snR38 SMM1P53720 384 aaKnown RBP-0.48□□□□□ -2.49
snR38snR38 CRN1Q06440 651 aa-0.48□□□□□ -2.49
snR38snR38 CDD1Q06549 142 aa-0.48□□□□□ -2.49
snR38snR38 PLP2Q12017 286 aa-0.48□□□□□ -2.49
snR38snR38 SWT1Q12104 458 aa-0.48□□□□□ -2.49
snR38snR38 PSF3Q12146 194 aa-0.48□□□□□ -2.49
snR38snR38 YDR061WQ12298 539 aa-0.48□□□□□ -2.49
snR38snR38 NFT1P0CE68 1218 aa-0.49□□□□□ -2.49
snR38snR38 MRP13P12686 339 aa-0.49□□□□□ -2.49
snR38snR38 NDI1P32340 513 aa-0.49□□□□□ -2.49
snR38snR38 RSM22P36056 628 aa-0.49□□□□□ -2.49
snR38snR38 MIX23P38162 196 aa-0.49□□□□□ -2.49
snR38snR38 WSS1P38838 269 aa-0.49□□□□□ -2.49
snR38snR38 YHR210CP38893 341 aa-0.49□□□□□ -2.49
snR38snR38 TFB2Q02939 513 aa-0.49□□□□□ -2.49
snR38snR38 IVY1Q04934 453 aa-0.49□□□□□ -2.49
snR38snR38 NSE3Q05541 303 aa-0.49□□□□□ -2.49
snR38snR38 FAR10Q06001 478 aa-0.49□□□□□ -2.49
snR38snR38 YPL199CQ08954 240 aa-0.49□□□□□ -2.49
snR38snR38 FOL3Q12676 427 aaPredicted RBP-0.49□□□□□ -2.49
snR38snR38 YOR338WQ99326 363 aa-0.49□□□□□ -2.49
snR38snR38 PUT2P07275 575 aa-0.5□□□□□ -2.49
snR38snR38 YML003WP0CF16 290 aa-0.5□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms