RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	MIP6	P38760	659 aa	Known RBP	4.24	□□□□□ -1.73
SPN1	YPR133C	BDH2	P39713	417 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	TMN3	P40071	706 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	FAU1	P40099	211 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	MKT1	P40850	830 aa	Known RBP	4.24	□□□□□ -1.73
SPN1	YPR133C	RRT5	P43607	289 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	ALK1	P43633	760 aa	Known RBP	4.24	□□□□□ -1.73
SPN1	YPR133C	YJL132W	P47014	750 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	TCB2	P48231	1178 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	HST1	P53685	503 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	YNL143C	P53908	130 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	TRS23	Q03784	219 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	DIC1	Q06143	298 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	TMA10	Q06177	86 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	YPR196W	Q06595	470 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	HBT1	Q07653	1046 aa	Known RBP	4.24	□□□□□ -1.73
SPN1	YPR133C	PLB3	Q08108	686 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	YOL024W	Q08172	172 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	TRM8	Q12009	286 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	IZH4	Q99393	312 aa		4.24	□□□□□ -1.73
SPN1	YPR133C	TRX1	P22217	103 aa	Known RBP	4.23	□□□□□ -1.73
SPN1	YPR133C	UBA1	P22515	1024 aa	Known RBP	4.23	□□□□□ -1.73
SPN1	YPR133C	RFA2	P26754	273 aa	Known RBP	4.23	□□□□□ -1.73
SPN1	YPR133C	GSY2	P27472	705 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	TAF14	P35189	244 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	ARA1	P38115	344 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	IML3	P38265	245 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	GPP2	P40106	250 aa	Known RBP	4.23	□□□□□ -1.73
SPN1	YPR133C	HOS4	P40480	1083 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	IST3	P40565	148 aa	Predicted RBP	4.23	□□□□□ -1.73
SPN1	YPR133C	GZF3	P42944	551 aa	Known RBP	4.23	□□□□□ -1.73
SPN1	YPR133C	CAF16	P43569	289 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	MNN11	P46985	422 aa	Known RBP	4.23	□□□□□ -1.73
SPN1	YPR133C	YGL108C	P53139	140 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	YGR111W	P53265	400 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	REG1	Q00816	1014 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	SNP1	Q00916	300 aa	Predicted RBP	4.23	□□□□□ -1.73
SPN1	YPR133C	YMR160W	Q03823	816 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	VID22	Q05934	901 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	PGC1	Q08959	321 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	YPL272C	Q08984	517 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
SPN1	YPR133C	YDR262W	Q12331	272 aa		4.23	□□□□□ -1.73
SPN1	YPR133C	COX5A	P00424	153 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	TUB3	P09734	445 aa	Known RBP	4.22	□□□□□ -1.73
SPN1	YPR133C	APA1	P16550	321 aa	Known RBP	4.22	□□□□□ -1.73
SPN1	YPR133C	YCR006C	P25350	157 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SPN1	YPR133C	STO1	P34160	861 aa	Known RBP	4.22	□□□□□ -1.73
SPN1	YPR133C	BIT2	P38346	545 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	AIM18	P38884	321 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	PLB1	P39105	664 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	TIM17	P39515	158 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	RPH1	P39956	796 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	TOK1	P40310	691 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	ATM1	P40416	690 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	SSU1	P41930	458 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	CHA4	P43634	648 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	BUD13	P46947	266 aa	Predicted RBP	4.22	□□□□□ -1.73
SPN1	YPR133C	BIR1	P47134	954 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	YGL260W	P53056	76 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	TIM13	P53299	105 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	VPS9	P54787	451 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	YML131W	Q03102	365 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	ATP25	Q03153	612 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	ERV41	Q04651	352 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	GSF2	Q04697	403 aa	Known RBP	4.22	□□□□□ -1.73
SPN1	YPR133C	RSC3	Q06639	885 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	ERP4	Q12450	207 aa		4.22	□□□□□ -1.73
SPN1	YPR133C	EFG1	Q3E705	233 aa	Known RBP	4.22	□□□□□ -1.73
SPN1	YPR133C	HMG1	P12683	1054 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	EPT1	P22140	391 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	NTH1	P32356	751 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	MVD1	P32377	396 aa	Known RBP	4.21	□□□□□ -1.74
SPN1	YPR133C	DAL3	P32459	195 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	HXT3	P32466	567 aa	Known RBP	4.21	□□□□□ -1.74
SPN1	YPR133C	AEP1	P32493	518 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	CDC13	P32797	924 aa	Known RBP	4.21	□□□□□ -1.74
SPN1	YPR133C	SEF1	P34228	1148 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	MRPL37	P36532	105 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	ELO3	P40319	345 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	URM1	P40554	99 aa	Predicted RBP	4.21	□□□□□ -1.74
SPN1	YPR133C	YIR014W	P40570	242 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	YFR018C	P43599	363 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	ROK1	P45818	564 aa	Predicted RBP	4.21	□□□□□ -1.74
SPN1	YPR133C	RAI1	P53063	387 aa	Known RBP	4.21	□□□□□ -1.74
SPN1	YPR133C	COG1	P53079	417 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	STR3	P53101	465 aa	Known RBP	4.21	□□□□□ -1.74
SPN1	YPR133C	YGR127W	P53275	312 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	YNL247W	P53852	767 aa	Known RBP	4.21	□□□□□ -1.74
SPN1	YPR133C	ENT5	Q03769	411 aa	Known RBP	4.21	□□□□□ -1.74
SPN1	YPR133C	EMI1	Q04406	187 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	CIA1	Q05583	330 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	ATG33	Q06485	197 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	PFA4	Q12006	378 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	RMP1	Q12530	201 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	SEY1	Q99287	776 aa		4.21	□□□□□ -1.74
SPN1	YPR133C	PHO84	P25297	587 aa	Known RBP	4.2	□□□□□ -1.74
SPN1	YPR133C	DCC1	P25559	380 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	DBF20	P32328	564 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms