RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C RAD26P40352 1085 aa2.12□□□□□ -2.07
ATG11YPR049C PRP24P49960 444 aaKnown RBP2.12□□□□□ -2.07
ATG11YPR049C YGL108CP53139 140 aa2.12□□□□□ -2.07
ATG11YPR049C USV1Q12132 391 aa2.12□□□□□ -2.07
ATG11YPR049C HOS1Q12214 470 aa2.12□□□□□ -2.07
ATG11YPR049C SFI1Q12369 946 aa2.12□□□□□ -2.07
ATG11YPR049C KCS1Q12494 1050 aa2.12□□□□□ -2.07
ATG11YPR049C RRP12Q12754 1228 aaKnown RBP2.12□□□□□ -2.07
ATG11YPR049C NOP14Q99207 810 aaKnown RBP2.12□□□□□ -2.07
ATG11YPR049C VAS1P07806 1104 aaKnown RBP2.11□□□□□ -2.07
ATG11YPR049C HOG1P32485 435 aa2.11□□□□□ -2.07
ATG11YPR049C TDP1P38319 544 aa2.11□□□□□ -2.07
ATG11YPR049C ERP2P39704 215 aa2.11□□□□□ -2.07
ATG11YPR049C YGR250CP53316 781 aaKnown RBP2.11□□□□□ -2.07
ATG11YPR049C GND2P53319 492 aa2.11□□□□□ -2.07
ATG11YPR049C BSC5P53755 489 aa2.11□□□□□ -2.07
ATG11YPR049C MET14Q02196 202 aa2.11□□□□□ -2.07
ATG11YPR049C REC102Q02721 264 aa2.11□□□□□ -2.07
ATG11YPR049C UME1Q03010 460 aa2.11□□□□□ -2.07
ATG11YPR049C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
ATG11YPR049C IRC13Q08630 104 aa2.11□□□□□ -2.07
ATG11YPR049C HER1Q12276 1246 aa2.11□□□□□ -2.07
ATG11YPR049C TEF1P02994 458 aaKnown RBP2.11□□□□□ -2.07
ATG11YPR049C ARF2P19146 181 aaKnown RBP2.11□□□□□ -2.07
ATG11YPR049C URA4P20051 364 aa2.11□□□□□ -2.07
ATG11YPR049C STP22P25604 385 aa2.11□□□□□ -2.07
ATG11YPR049C SEC6P32844 805 aa2.11□□□□□ -2.07
ATG11YPR049C YJL206CP39529 758 aa2.11□□□□□ -2.07
ATG11YPR049C NDC80P40460 691 aa2.11□□□□□ -2.07
ATG11YPR049C RPS10BP46784 105 aaKnown RBP2.11□□□□□ -2.07
ATG11YPR049C COP1P53622 1201 aaKnown RBP2.11□□□□□ -2.07
ATG11YPR049C YNL144CP53907 740 aa2.11□□□□□ -2.07
ATG11YPR049C VPS36Q06696 566 aa2.11□□□□□ -2.07
ATG11YPR049C RPS10AQ08745 105 aaPredicted RBP2.11□□□□□ -2.07
ATG11YPR049C SRP72P38688 640 aaKnown RBP2.11□□□□□ -2.07
ATG11YPR049C LYS9P38999 446 aa2.11□□□□□ -2.07
ATG11YPR049C YNL195CP40168 261 aa2.11□□□□□ -2.07
ATG11YPR049C ARO80Q04052 950 aa2.11□□□□□ -2.07
ATG11YPR049C TLG2Q08144 397 aa2.11□□□□□ -2.07
ATG11YPR049C DIN7Q12086 430 aa2.11□□□□□ -2.07
ATG11YPR049C LEU9Q12166 604 aaKnown RBP2.11□□□□□ -2.07
ATG11YPR049C YLR149CQ99296 730 aa2.11□□□□□ -2.07
ATG11YPR049C BI3Q9ZZW7 517 aa2.11□□□□□ -2.07
ATG11YPR049C APA1P16550 321 aaKnown RBP2.1□□□□□ -2.07
ATG11YPR049C CAP1P28495 268 aaKnown RBP2.1□□□□□ -2.07
ATG11YPR049C PSO2P30620 661 aa2.1□□□□□ -2.07
ATG11YPR049C FAA1P30624 700 aaKnown RBP2.1□□□□□ -2.07
ATG11YPR049C PMT2P31382 759 aa2.1□□□□□ -2.07
ATG11YPR049C BET3P36149 193 aa2.1□□□□□ -2.07
ATG11YPR049C YEL073CP39974 107 aa2.1□□□□□ -2.07
ATG11YPR049C RSM25P40496 264 aa2.1□□□□□ -2.07
ATG11YPR049C IST3P40565 148 aaPredicted RBP2.1□□□□□ -2.07
ATG11YPR049C PXA1P41909 870 aa2.1□□□□□ -2.07
ATG11YPR049C IDS2P46958 469 aa2.1□□□□□ -2.07
ATG11YPR049C YJR039WP47107 1121 aa2.1□□□□□ -2.07
ATG11YPR049C COG1P53079 417 aa2.1□□□□□ -2.07
ATG11YPR049C UGO1Q03327 502 aa2.1□□□□□ -2.07
ATG11YPR049C YLR297WQ05899 129 aa2.1□□□□□ -2.07
ATG11YPR049C TUB3P09734 445 aaKnown RBP2.1□□□□□ -2.07
ATG11YPR049C MTF2P10849 440 aa2.1□□□□□ -2.07
ATG11YPR049C POL30P15873 258 aaKnown RBP2.1□□□□□ -2.07
ATG11YPR049C PRP6P19735 899 aaPredicted RBP2.1□□□□□ -2.07
ATG11YPR049C YIL152WP40455 235 aa2.1□□□□□ -2.07
ATG11YPR049C MKT1P40850 830 aaKnown RBP2.1□□□□□ -2.07
ATG11YPR049C BST1P43571 1029 aa2.1□□□□□ -2.07
ATG11YPR049C COG7P53195 279 aa2.1□□□□□ -2.07
ATG11YPR049C RPN14P53196 417 aa2.1□□□□□ -2.07
ATG11YPR049C MUS81Q04149 632 aaPredicted RBP2.1□□□□□ -2.07
ATG11YPR049C RRP6Q12149 733 aaKnown RBP2.1□□□□□ -2.07
ATG11YPR049C YDR262WQ12331 272 aa2.1□□□□□ -2.07
ATG11YPR049C RAD3P06839 778 aa2.09□□□□□ -2.07
ATG11YPR049C YIH1P25637 258 aa2.09□□□□□ -2.07
ATG11YPR049C CSG2P35206 410 aa2.09□□□□□ -2.07
ATG11YPR049C PFD1P46988 109 aa2.09□□□□□ -2.07
ATG11YPR049C BNA3P47039 444 aaKnown RBP2.09□□□□□ -2.07
ATG11YPR049C SWC4P53201 476 aa2.09□□□□□ -2.07
ATG11YPR049C ZRG17P53735 605 aa2.09□□□□□ -2.07
ATG11YPR049C TRM112P53738 135 aaPredicted RBP2.09□□□□□ -2.07
ATG11YPR049C ERG13P54839 491 aaKnown RBP2.09□□□□□ -2.07
ATG11YPR049C YDR132CQ03900 495 aa2.09□□□□□ -2.07
ATG11YPR049C ATG10Q07879 167 aa2.09□□□□□ -2.07
ATG11YPR049C YPR089WO13585 888 aa2.09□□□□□ -2.07
ATG11YPR049C RPL15AP05748 204 aaKnown RBP2.09□□□□□ -2.07
ATG11YPR049C PMS1P14242 873 aa2.09□□□□□ -2.07
ATG11YPR049C SPR1P32603 445 aa2.09□□□□□ -2.07
ATG11YPR049C HBS1P32769 611 aaKnown RBP2.09□□□□□ -2.07
ATG11YPR049C UGP1P32861 499 aaKnown RBP2.09□□□□□ -2.07
ATG11YPR049C FMP46P36141 133 aaKnown RBP2.09□□□□□ -2.07
ATG11YPR049C MRPL36P36531 177 aa2.09□□□□□ -2.07
ATG11YPR049C TAE1P38340 232 aa2.09□□□□□ -2.07
ATG11YPR049C GND1P38720 489 aaKnown RBP2.09□□□□□ -2.07
ATG11YPR049C PMC1P38929 1173 aaPredicted RBP2.09□□□□□ -2.07
ATG11YPR049C MET12P46151 657 aa2.09□□□□□ -2.07
ATG11YPR049C YAP1802P53309 568 aa2.09□□□□□ -2.07
ATG11YPR049C RPL15BP54780 204 aaPredicted RBP2.09□□□□□ -2.07
ATG11YPR049C CCE1Q03702 353 aa2.09□□□□□ -2.07
ATG11YPR049C ARA2Q04212 335 aa2.09□□□□□ -2.07
ATG11YPR049C BUD7Q08754 746 aa2.09□□□□□ -2.07
ATG11YPR049C SMF3Q12078 473 aaPredicted RBP2.09□□□□□ -2.07
ATG11YPR049C YPT1P01123 206 aaKnown RBP2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms