RNA–Protein interactions for RNA: YPL273W

SAM4, Transcript of S-adenosylmethionine-homocysteine methyltransferase, yeast

Gene SAM4, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM4	YPL273W	GAS1	P22146	559 aa	Known RBP	5.19	□□□□□ -1.58
SAM4	YPL273W	VPS34	P22543	875 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	YSR3	P23501	404 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	BEM1	P29366	551 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	PAP1	P29468	568 aa	Known RBP	5.19	□□□□□ -1.58
SAM4	YPL273W	URA10	P30402	227 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	PET309	P32522	965 aa	Predicted RBP	5.19	□□□□□ -1.58
SAM4	YPL273W	DOM34	P33309	386 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	TOM20	P35180	183 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	MRPL37	P36532	105 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	YSW1	P38280	609 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	CFD1	P40558	293 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	ALR2	P43553	858 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	PEX8	P53248	589 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	CSL4	P53859	292 aa	Predicted RBP	5.19	□□□□□ -1.58
SAM4	YPL273W	ARP4	P80428	489 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	UTP6	Q02354	440 aa	Known RBP	5.19	□□□□□ -1.58
SAM4	YPL273W	NHX1	Q04121	633 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	URH1	Q04179	340 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	YDR109C	Q04585	715 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	DIC1	Q06143	298 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	BSC6	Q08280	497 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	SLD7	Q08457	257 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	PFA4	Q12006	378 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	YOR012W	Q12351	137 aa		5.19	□□□□□ -1.58
SAM4	YPL273W	MDM35	O60200	86 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	SPS1	P08458	490 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	YML002W	P0CF17	737 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	YCR099C	P25657	155 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	HOG1	P32485	435 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	CDC13	P32797	924 aa	Known RBP	5.18	□□□□□ -1.58
SAM4	YPL273W	EMC3	P36039	253 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	LYS1	P38998	373 aa	RIP-Chip data	5.18	□□□□□ -1.58	not detected
SAM4	YPL273W	PEX7	P39108	375 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	YAR028W	P39548	234 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	MEF2	P39677	819 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	GIM4	P40005	111 aa	Known RBP	5.18	□□□□□ -1.58
SAM4	YPL273W	NDC80	P40460	691 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	MAD1	P40957	749 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	YFL012W	P43580	148 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	RTS3	P53289	263 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	ECM9	Q02202	377 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	NOG1	Q02892	647 aa	Known RBP	5.18	□□□□□ -1.58
SAM4	YPL273W	TFB2	Q02939	513 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	TPP1	Q03796	238 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	RSC3	Q06639	885 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	GRS2	Q06817	618 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	PUS7	Q08647	676 aa	Known RBP	5.18	□□□□□ -1.58
SAM4	YPL273W	ACM1	Q08981	209 aa		5.18	□□□□□ -1.58
SAM4	YPL273W	SPO16	P17122	198 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	ATP12	P22135	325 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	CDC20	P26309	610 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	MF(ALPHA)2	P32435	120 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	DEF1	P35732	738 aa	Known RBP	5.17	□□□□□ -1.58
SAM4	YPL273W	NTR2	P36118	322 aa	Predicted RBP	5.17	□□□□□ -1.58
SAM4	YPL273W	RPF2	P36160	344 aa	Known RBP	5.17	□□□□□ -1.58
SAM4	YPL273W	TRM7	P38238	310 aa	Known RBP	5.17	□□□□□ -1.58
SAM4	YPL273W	ATG14	P38270	344 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	PTC7	P38797	343 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	YHR182W	P38870	785 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	ALK1	P43633	760 aa	Known RBP	5.17	□□□□□ -1.58
SAM4	YPL273W	NMD5	P46970	1048 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	ATG36	P46983	293 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	ARE2	P53629	642 aa	Known RBP	5.17	□□□□□ -1.58
SAM4	YPL273W	RHO3	Q00245	231 aa	Known RBP	5.17	□□□□□ -1.58
SAM4	YPL273W	ROT1	Q03691	256 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	SIZ1	Q04195	904 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	DAL4	Q04895	635 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	GPR1	Q12361	961 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	RMD5	Q12508	421 aa		5.17	□□□□□ -1.58
SAM4	YPL273W	RRP12	Q12754	1228 aa	Known RBP	5.17	□□□□□ -1.58
SAM4	YPL273W	CMD1	P06787	147 aa	Known RBP	5.16	□□□□□ -1.58
SAM4	YPL273W	GCR1	P07261	785 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	PHO4	P07270	312 aa	Known RBP	5.16	□□□□□ -1.58
SAM4	YPL273W	URA7	P28274	579 aa	Known RBP	5.16	□□□□□ -1.58
SAM4	YPL273W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
SAM4	YPL273W	UBC6	P33296	250 aa	Predicted RBP	5.16	□□□□□ -1.58
SAM4	YPL273W	SKN1	P33336	771 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	RRP1	P35178	278 aa	Predicted RBP	5.16	□□□□□ -1.58
SAM4	YPL273W	SQT1	P35184	431 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	YHR033W	P38690	423 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	YHR045W	P38775	560 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	CCT4	P39078	528 aa	Known RBP	5.16	□□□□□ -1.58
SAM4	YPL273W	LRO1	P40345	661 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	COG6	P53959	839 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	RPL22B	P56628	122 aa	Known RBP	5.16	□□□□□ -1.58
SAM4	YPL273W	YOL073C	Q08232	322 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	CUE5	Q08412	411 aa	Known RBP	5.16	□□□□□ -1.58
SAM4	YPL273W	YOR389W	Q08912	624 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	YPL278C	Q08990	100 aa		5.16	□□□□□ -1.58
SAM4	YPL273W	HSH49	Q99181	213 aa	Predicted RBP	5.16	□□□□□ -1.58
SAM4	YPL273W	PRP8	P33334	2413 aa	Known RBP	5.15	□□□□□ -1.58
SAM4	YPL273W	FUM1	P08417	488 aa	Known RBP	5.15	□□□□□ -1.59
SAM4	YPL273W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
SAM4	YPL273W	CBF1	P17106	351 aa		5.15	□□□□□ -1.59
SAM4	YPL273W	HOP1	P20050	605 aa		5.15	□□□□□ -1.59
SAM4	YPL273W	PHO3	P24031	467 aa		5.15	□□□□□ -1.59
SAM4	YPL273W	NTH1	P32356	751 aa		5.15	□□□□□ -1.59
SAM4	YPL273W	ATP11	P32453	318 aa		5.15	□□□□□ -1.59
SAM4	YPL273W	GDA1	P32621	518 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms