RNA–Protein interactions for RNA: YPL194W

DDC1, Transcript of DNA damage checkpoint protein, yeast

Gene DDC1, Length 1,839 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDC1	YPL194W	RCY1	P39531	840 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	PZF1	P39933	429 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	FKH2	P41813	862 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	TAH11	P47112	604 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	TAM41	P53230	385 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	MAL12	P53341	584 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	DBP6	P53734	629 aa	Known RBP	5.69	□□□□□ -1.5
DDC1	YPL194W	VPS64	Q03944	604 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	BNA7	Q04066	261 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	RDR1	Q08904	546 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	AEP3	Q12089	606 aa		5.69	□□□□□ -1.5
DDC1	YPL194W	ERG27	Q12452	347 aa	Known RBP	5.69	□□□□□ -1.5
DDC1	YPL194W	SPO7	P18410	259 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	VPS33	P20795	691 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	UTR1	P21373	530 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	RPS7A	P26786	190 aa	Known RBP	5.68	□□□□□ -1.5
DDC1	YPL194W	TPS2	P31688	896 aa	Known RBP	5.68	□□□□□ -1.5
DDC1	YPL194W	SSE2	P32590	693 aa	Known RBP	5.68	□□□□□ -1.5
DDC1	YPL194W	PET127	P32606	800 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	SWC5	P38326	303 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	CBR1	P38626	284 aa	Known RBP	5.68	□□□□□ -1.5
DDC1	YPL194W	SUR2	P38992	349 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	PCL6	P40038	420 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	VFA1	P40080	203 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	MAF1	P41910	395 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	YJL107C	P42947	387 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	NMD5	P46970	1048 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	YGR149W	P48236	432 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	RIB4	P50861	169 aa	Predicted RBP	5.68	□□□□□ -1.5
DDC1	YPL194W	YGL114W	P53134	725 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	MUS81	Q04149	632 aa	Predicted RBP	5.68	□□□□□ -1.5
DDC1	YPL194W	PDS5	Q04264	1277 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	YPR196W	Q06595	470 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	FMP16	Q12497	93 aa		5.68	□□□□□ -1.5
DDC1	YPL194W	CHL1	P22516	861 aa	Predicted RBP	5.67	□□□□□ -1.5
DDC1	YPL194W	SEC61	P32915	480 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	AHP1	P38013	176 aa	Known RBP	5.67	□□□□□ -1.5
DDC1	YPL194W	RTT107	P38850	1070 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	END3	P39013	349 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	CIN1	P40987	1014 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	IME4	P41833	600 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	CTK2	P46962	323 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	CTR1	P49573	406 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	YGL036W	P53185	909 aa	Predicted RBP	5.67	□□□□□ -1.5
DDC1	YPL194W	EAF7	P53911	425 aa	Known RBP	5.67	□□□□□ -1.5
DDC1	YPL194W	RRG8	Q06109	277 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	CTS2	Q06350	511 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	BSC6	Q08280	497 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	NRT1	Q08485	598 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	TIP41	Q12199	356 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	CDC4	P07834	779 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	MSF1	P08425	469 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	HMG2	P12684	1045 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	SEC63	P14906	663 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	KGD1	P20967	1014 aa	Known RBP	5.67	□□□□□ -1.5
DDC1	YPL194W	RNR1	P21524	888 aa	Known RBP	5.67	□□□□□ -1.5
DDC1	YPL194W	SPR1	P32603	445 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	RRP1	P35178	278 aa	Predicted RBP	5.67	□□□□□ -1.5
DDC1	YPL194W	TAT1	P38085	619 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	POP7	P38291	140 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	FAD1	P38913	306 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	SNZ3	P43545	298 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	DIA3	P52290	468 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	SNZ2	P53824	298 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	YKR011C	Q02209	353 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	ARP10	Q04549	284 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	STP3	Q05937	343 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	SEC10	Q06245	871 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	ECM30	Q06673	1274 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	SNA4	Q07549	140 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	ATG31	Q12421	196 aa		5.67	□□□□□ -1.5
DDC1	YPL194W	SEC3	P33332	1336 aa	Known RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	RPL24A	P04449	155 aa	Known RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	DPB2	P24482	689 aa	Predicted RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	YIH1	P25637	258 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	PRP45	P28004	379 aa	Predicted RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	RAD14	P28519	371 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	IMP3	P32899	183 aa	Predicted RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	TCD2	P36101	447 aa	Known RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	APT2	P36973	181 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	PPS1	P38148	807 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	APN2	P38207	520 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	TOS1	P38288	455 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	RPN3	P40016	523 aa	Known RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	DUS1	P53759	423 aa	Known RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	CUS2	P53830	285 aa	Predicted RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	BOP3	P53958	396 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	DIA1	P54005	336 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	WAR1	Q03631	944 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	ENT5	Q03769	411 aa	Known RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	RSM24	Q03976	319 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	GFD1	Q04839	188 aa	Known RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	RSA3	Q05942	220 aa	Known RBP	5.66	□□□□□ -1.5
DDC1	YPL194W	ATG17	Q06410	417 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	FRE3	Q08905	711 aa		5.66	□□□□□ -1.5
DDC1	YPL194W	TRP3	P00937	484 aa		5.65	□□□□□ -1.5
DDC1	YPL194W	ARD1	P07347	238 aa	Predicted RBP	5.65	□□□□□ -1.5
DDC1	YPL194W	TUB3	P09734	445 aa	Known RBP	5.65	□□□□□ -1.5
DDC1	YPL194W	YCP4	P25349	247 aa	Known RBP	5.65	□□□□□ -1.5
DDC1	YPL194W	PRO3	P32263	286 aa	Known RBP	5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms