RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W MDL1P33310 695 aa3.24□□□□□ -1.89
SRL1YOR247W CUE2P36075 443 aaKnown RBP3.24□□□□□ -1.89
SRL1YOR247W YKL023WP36103 277 aaKnown RBP3.24□□□□□ -1.89
SRL1YOR247W ROT2P38138 954 aa3.24□□□□□ -1.89
SRL1YOR247W APE4P38821 490 aa3.24□□□□□ -1.89
SRL1YOR247W RIX1P38883 763 aaPredicted RBP3.24□□□□□ -1.89
SRL1YOR247W VRG4P40107 337 aa3.24□□□□□ -1.89
SRL1YOR247W LTP1P40347 161 aa3.24□□□□□ -1.89
SRL1YOR247W ATF1P40353 525 aa3.24□□□□□ -1.89
SRL1YOR247W NMD5P46970 1048 aa3.24□□□□□ -1.89
SRL1YOR247W YJL055WP47044 245 aa3.24□□□□□ -1.89
SRL1YOR247W URB2P47108 1174 aa3.24□□□□□ -1.89
SRL1YOR247W VPS25P47142 202 aa3.24□□□□□ -1.89
SRL1YOR247W FMS1P50264 508 aa3.24□□□□□ -1.89
SRL1YOR247W DUG3P53871 357 aa3.24□□□□□ -1.89
SRL1YOR247W IDP3P53982 420 aaKnown RBP3.24□□□□□ -1.89
SRL1YOR247W RPC11Q04307 110 aaPredicted RBP3.24□□□□□ -1.89
SRL1YOR247W MCP2Q06567 569 aa3.24□□□□□ -1.89
SRL1YOR247W RPS10AQ08745 105 aaPredicted RBP3.24□□□□□ -1.89
SRL1YOR247W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SRL1YOR247W RRI1Q12468 440 aa3.24□□□□□ -1.89
SRL1YOR247W SPS4P09937 338 aa3.23□□□□□ -1.89
SRL1YOR247W ERG11P10614 530 aa3.23□□□□□ -1.89
SRL1YOR247W SNF3P10870 884 aa3.23□□□□□ -1.89
SRL1YOR247W PRP2P20095 876 aaPredicted RBP3.23□□□□□ -1.89
SRL1YOR247W BUD14P27637 709 aa3.23□□□□□ -1.89
SRL1YOR247W HXT3P32466 567 aaKnown RBP3.23□□□□□ -1.89
SRL1YOR247W VPH1P32563 840 aaKnown RBP3.23□□□□□ -1.89
SRL1YOR247W YME2P32843 850 aa3.23□□□□□ -1.89
SRL1YOR247W SHP1P34223 423 aa3.23□□□□□ -1.89
SRL1YOR247W MTR2P34232 184 aaKnown RBP3.23□□□□□ -1.89
SRL1YOR247W TUL1P36096 758 aa3.23□□□□□ -1.89
SRL1YOR247W UBA4P38820 440 aa3.23□□□□□ -1.89
SRL1YOR247W CAK1P43568 368 aaPredicted RBP3.23□□□□□ -1.89
SRL1YOR247W RPS10BP46784 105 aaKnown RBP3.23□□□□□ -1.89
SRL1YOR247W SNG1P46950 547 aa3.23□□□□□ -1.89
SRL1YOR247W YGL138CP53122 345 aa3.23□□□□□ -1.89
SRL1YOR247W YVH1Q02256 364 aaKnown RBP3.23□□□□□ -1.89
SRL1YOR247W VTC3Q02725 835 aa3.23□□□□□ -1.89
SRL1YOR247W MSC1Q03104 513 aa3.23□□□□□ -1.89
SRL1YOR247W YMR160WQ03823 816 aa3.23□□□□□ -1.89
SRL1YOR247W ARX1Q03862 593 aaKnown RBP3.23□□□□□ -1.89
SRL1YOR247W GYL1Q04322 720 aa3.23□□□□□ -1.89
SRL1YOR247W RRP45Q05636 305 aaKnown RBP3.23□□□□□ -1.89
SRL1YOR247W YDL057WQ07379 328 aa3.23□□□□□ -1.89
SRL1YOR247W PDH1Q12428 516 aaKnown RBP3.23□□□□□ -1.89
SRL1YOR247W SPT7P35177 1332 aa3.22□□□□□ -1.89
SRL1YOR247W RHO2P06781 192 aa3.22□□□□□ -1.89
SRL1YOR247W CNA1P23287 553 aa3.22□□□□□ -1.89
SRL1YOR247W AFG1P32317 509 aa3.22□□□□□ -1.89
SRL1YOR247W RML2P32611 393 aa3.22□□□□□ -1.89
SRL1YOR247W VPS41P38959 992 aa3.22□□□□□ -1.89
SRL1YOR247W MBB1P39534 108 aa3.22□□□□□ -1.89
SRL1YOR247W NET1P47035 1189 aa3.22□□□□□ -1.89
SRL1YOR247W PYK2P52489 506 aaKnown RBP3.22□□□□□ -1.89
SRL1YOR247W EAF7P53911 425 aaKnown RBP3.22□□□□□ -1.89
SRL1YOR247W ERG13P54839 491 aaKnown RBP3.22□□□□□ -1.89
SRL1YOR247W SHR3Q02774 210 aa3.22□□□□□ -1.89
SRL1YOR247W OAZ1Q02803 292 aa3.22□□□□□ -1.89
SRL1YOR247W HOT1Q03213 719 aa3.22□□□□□ -1.89
SRL1YOR247W CTL1Q03220 320 aaKnown RBP3.22□□□□□ -1.89
SRL1YOR247W SOV1Q04748 898 aa3.22□□□□□ -1.89
SRL1YOR247W RBS1Q05672 457 aaKnown RBP3.22□□□□□ -1.89
SRL1YOR247W COQ9Q05779 260 aa3.22□□□□□ -1.89
SRL1YOR247W POS5Q06892 414 aa3.22□□□□□ -1.89
SRL1YOR247W FMP45Q07651 309 aa3.22□□□□□ -1.89
SRL1YOR247W THP1Q08231 455 aa3.22□□□□□ -1.89
SRL1YOR247W OSW1Q08692 278 aa3.22□□□□□ -1.89
SRL1YOR247W RDR1Q08904 546 aa3.22□□□□□ -1.89
SRL1YOR247W PFA4Q12006 378 aa3.22□□□□□ -1.89
SRL1YOR247W NDJ1Q12366 352 aa3.22□□□□□ -1.89
SRL1YOR247W PAR32Q12515 295 aaKnown RBP3.22□□□□□ -1.89
SRL1YOR247W CTF3Q12748 733 aa3.22□□□□□ -1.89
SRL1YOR247W CBP1P07252 654 aa3.21□□□□□ -1.9
SRL1YOR247W PEP5P12868 1029 aa3.21□□□□□ -1.9
SRL1YOR247W APE1P14904 514 aa3.21□□□□□ -1.9
SRL1YOR247W PPH22P23595 377 aa3.21□□□□□ -1.9
SRL1YOR247W SPB1P25582 841 aaPredicted RBP3.21□□□□□ -1.9
SRL1YOR247W ERV1P27882 189 aa3.21□□□□□ -1.9
SRL1YOR247W IDH2P28241 369 aaKnown RBP3.21□□□□□ -1.9
SRL1YOR247W SNC1P31109 117 aa3.21□□□□□ -1.9
SRL1YOR247W RXT2P38255 430 aa3.21□□□□□ -1.9
SRL1YOR247W LAG1P38703 411 aa3.21□□□□□ -1.9
SRL1YOR247W TOM71P38825 639 aaKnown RBP3.21□□□□□ -1.9
SRL1YOR247W YHR210CP38893 341 aa3.21□□□□□ -1.9
SRL1YOR247W SEC28P40509 296 aaKnown RBP3.21□□□□□ -1.9
SRL1YOR247W YIL060WP40519 144 aa3.21□□□□□ -1.9
SRL1YOR247W ULP2P40537 1034 aaPredicted RBP3.21□□□□□ -1.9
SRL1YOR247W CFD1P40558 293 aa3.21□□□□□ -1.9
SRL1YOR247W ATG27P46989 271 aa3.21□□□□□ -1.9
SRL1YOR247W COS5P47187 383 aa3.21□□□□□ -1.9
SRL1YOR247W YGR149WP48236 432 aa3.21□□□□□ -1.9
SRL1YOR247W RMD9P53140 646 aaKnown RBP3.21□□□□□ -1.9
SRL1YOR247W YGR111WP53265 400 aa3.21□□□□□ -1.9
SRL1YOR247W SMM1P53720 384 aaKnown RBP3.21□□□□□ -1.9
SRL1YOR247W SKO1Q02100 647 aa3.21□□□□□ -1.9
SRL1YOR247W YML122CQ03207 126 aa3.21□□□□□ -1.9
SRL1YOR247W CAC2Q04199 468 aa3.21□□□□□ -1.9
SRL1YOR247W TAP42Q04372 366 aa3.21□□□□□ -1.9
SRL1YOR247W ADE13Q05911 482 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms