RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C ILS1P09436 1072 aaKnown RBP4.38□□□□□ -1.71
VPS21YOR089C ART10P18634 518 aaKnown RBP4.38□□□□□ -1.71
VPS21YOR089C SUI2P20459 304 aaKnown RBP4.38□□□□□ -1.71
VPS21YOR089C PRD1P25375 712 aa4.38□□□□□ -1.71
VPS21YOR089C PUP3P25451 205 aaKnown RBP4.38□□□□□ -1.71
VPS21YOR089C SAC1P32368 623 aaKnown RBP4.38□□□□□ -1.71
VPS21YOR089C VPH1P32563 840 aaKnown RBP4.38□□□□□ -1.71
VPS21YOR089C EMP70P32802 667 aa4.38□□□□□ -1.71
VPS21YOR089C STB6P36085 766 aa4.38□□□□□ -1.71
VPS21YOR089C DBP8P38719 431 aa4.38□□□□□ -1.71
VPS21YOR089C STU2P46675 888 aa4.38□□□□□ -1.71
VPS21YOR089C IMD4P50094 524 aaKnown RBP4.38□□□□□ -1.71
VPS21YOR089C ORC5P50874 479 aa4.38□□□□□ -1.71
VPS21YOR089C MNP1P53163 194 aaPredicted RBP4.38□□□□□ -1.71
VPS21YOR089C ERG26P53199 349 aaKnown RBP4.38□□□□□ -1.71
VPS21YOR089C PFA5Q03289 374 aa4.38□□□□□ -1.71
VPS21YOR089C ERB1Q04660 807 aaKnown RBP4.38□□□□□ -1.71
VPS21YOR089C IRC10Q08118 586 aa4.38□□□□□ -1.71
VPS21YOR089C RLM1Q12224 676 aa4.38□□□□□ -1.71
VPS21YOR089C YML133CQ03099 1374 aa4.38□□□□□ -1.71
VPS21YOR089C YLL067CQ07888 1374 aa4.38□□□□□ -1.71
VPS21YOR089C YLL066CQ99208 1374 aa4.38□□□□□ -1.71
VPS21YOR089C ARG81P05085 880 aa4.37□□□□□ -1.71
VPS21YOR089C KRS1P15180 591 aaKnown RBP4.37□□□□□ -1.71
VPS21YOR089C CLB1P24868 471 aa4.37□□□□□ -1.71
VPS21YOR089C GSY2P27472 705 aa4.37□□□□□ -1.71
VPS21YOR089C TFB1P32776 642 aa4.37□□□□□ -1.71
VPS21YOR089C PMT1P33775 817 aa4.37□□□□□ -1.71
VPS21YOR089C HCS1P34243 683 aa4.37□□□□□ -1.71
VPS21YOR089C MNN2P38069 597 aa4.37□□□□□ -1.71
VPS21YOR089C FTH1P38310 465 aa4.37□□□□□ -1.71
VPS21YOR089C TSC10P38342 320 aa4.37□□□□□ -1.71
VPS21YOR089C CIN4P39110 191 aa4.37□□□□□ -1.71
VPS21YOR089C PAC2P39937 518 aa4.37□□□□□ -1.71
VPS21YOR089C GDI1P39958 451 aaKnown RBP4.37□□□□□ -1.71
VPS21YOR089C SGN1P40561 250 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
VPS21YOR089C DLD2P46681 530 aaKnown RBP4.37□□□□□ -1.71
VPS21YOR089C YJL055WP47044 245 aa4.37□□□□□ -1.71
VPS21YOR089C APT1P49435 187 aaKnown RBP4.37□□□□□ -1.71
VPS21YOR089C SGF73P53165 657 aa4.37□□□□□ -1.71
VPS21YOR089C EMI2Q04409 500 aaKnown RBP4.37□□□□□ -1.71
VPS21YOR089C YOL159C-AQ3E769 90 aa4.37□□□□□ -1.71
VPS21YOR089C SEC3P33332 1336 aaKnown RBP4.37□□□□□ -1.71
VPS21YOR089C YLR419WQ06698 1435 aaKnown RBP4.37□□□□□ -1.71
VPS21YOR089C MDH1P17505 334 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
VPS21YOR089C MDL1P33310 695 aa4.36□□□□□ -1.71
VPS21YOR089C YBL055CP34220 418 aaPredicted RBP4.36□□□□□ -1.71
VPS21YOR089C YKL100CP34248 587 aa4.36□□□□□ -1.71
VPS21YOR089C MSR1P38714 643 aa4.36□□□□□ -1.71
VPS21YOR089C STB2P46679 850 aa4.36□□□□□ -1.71
VPS21YOR089C SAE2P46946 345 aa4.36□□□□□ -1.71
VPS21YOR089C KAP120Q02932 1032 aa4.36□□□□□ -1.71
VPS21YOR089C AIM32Q04689 311 aa4.36□□□□□ -1.71
VPS21YOR089C YLR455WQ06188 304 aa4.36□□□□□ -1.71
VPS21YOR089C IRC3Q06683 689 aa4.36□□□□□ -1.71
VPS21YOR089C TEN1Q07921 160 aa4.36□□□□□ -1.71
VPS21YOR089C RDL1Q12305 139 aaKnown RBP4.36□□□□□ -1.71
VPS21YOR089C MHP1P43638 1398 aa4.36□□□□□ -1.71
VPS21YOR089C DNF3Q12674 1656 aa4.35□□□□□ -1.71
VPS21YOR089C TKL1P23254 680 aaKnown RBP4.35□□□□□ -1.71
VPS21YOR089C MNE1P24720 663 aa4.35□□□□□ -1.71
VPS21YOR089C BUD5P25300 642 aaPredicted RBP4.35□□□□□ -1.71
VPS21YOR089C YMC1P32331 307 aa4.35□□□□□ -1.71
VPS21YOR089C NIP100P33420 868 aa4.35□□□□□ -1.71
VPS21YOR089C TIF3P34167 436 aaKnown RBP4.35□□□□□ -1.71
VPS21YOR089C ZIM17P42844 174 aa4.35□□□□□ -1.71
VPS21YOR089C YPR003CP53394 754 aa4.35□□□□□ -1.71
VPS21YOR089C FMP30Q02883 468 aa4.35□□□□□ -1.71
VPS21YOR089C PDH1Q12428 516 aaKnown RBP4.35□□□□□ -1.71
VPS21YOR089C AFI1Q99222 893 aa4.35□□□□□ -1.71
VPS21YOR089C BCK1Q01389 1478 aa4.35□□□□□ -1.71
VPS21YOR089C AQY1P0CD91 305 aa4.34□□□□□ -1.71
VPS21YOR089C KGD1P20967 1014 aaKnown RBP4.34□□□□□ -1.71
VPS21YOR089C CPR2P23285 205 aa4.34□□□□□ -1.71
VPS21YOR089C YCR006CP25350 157 aa4.34□□□□□ -1.71
VPS21YOR089C ILV6P25605 309 aaKnown RBP4.34□□□□□ -1.71
VPS21YOR089C OCT1P35999 772 aa4.34□□□□□ -1.71
VPS21YOR089C NUP133P36161 1157 aa4.34□□□□□ -1.71
VPS21YOR089C RPL32P38061 130 aaKnown RBP4.34□□□□□ -1.71
VPS21YOR089C NTC20P38302 140 aaPredicted RBP4.34□□□□□ -1.71
VPS21YOR089C YAP3P38749 330 aa4.34□□□□□ -1.71
VPS21YOR089C CAJ1P39101 391 aa4.34□□□□□ -1.71
VPS21YOR089C URB2P47108 1174 aa4.34□□□□□ -1.71
VPS21YOR089C UBP8P50102 471 aa4.34□□□□□ -1.71
VPS21YOR089C HOS2P53096 452 aaPredicted RBP4.34□□□□□ -1.71
VPS21YOR089C YNL144CP53907 740 aa4.34□□□□□ -1.71
VPS21YOR089C LGE1Q02796 332 aaKnown RBP4.34□□□□□ -1.71
VPS21YOR089C PDS5Q04264 1277 aa4.34□□□□□ -1.71
VPS21YOR089C ROY1Q04847 553 aa4.34□□□□□ -1.71
VPS21YOR089C DON1Q05610 365 aa4.34□□□□□ -1.71
VPS21YOR089C YLR345WQ06137 509 aa4.34□□□□□ -1.71
VPS21YOR089C PDR8Q06149 701 aa4.34□□□□□ -1.71
VPS21YOR089C ECM30Q06673 1274 aa4.34□□□□□ -1.71
VPS21YOR089C MCH4Q08268 501 aa4.34□□□□□ -1.71
VPS21YOR089C YDL007C-AQ2V2Q0 85 aa4.34□□□□□ -1.71
VPS21YOR089C BRR1Q99177 341 aaPredicted RBP4.34□□□□□ -1.71
VPS21YOR089C MRP13P12686 339 aa4.33□□□□□ -1.72
VPS21YOR089C RPL3P14126 387 aaKnown RBP4.33□□□□□ -1.72
VPS21YOR089C SRV2P17555 526 aaKnown RBP4.33□□□□□ -1.72
VPS21YOR089C MAK32P23060 363 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms