RNA–Protein interactions for RNA: YOR075W

UFE1, Transcript of t-SNARE protein required for retrograde vesicular traffic, yeast

Gene UFE1, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UFE1	YOR075W	MSC1	Q03104	513 aa		3.91	□□□□□ -1.78
UFE1	YOR075W	DIC1	Q06143	298 aa		3.91	□□□□□ -1.78
UFE1	YOR075W	FMP45	Q07651	309 aa		3.91	□□□□□ -1.78
UFE1	YOR075W	CDC45	Q08032	650 aa		3.91	□□□□□ -1.78
UFE1	YOR075W	THI20	Q08224	551 aa		3.91	□□□□□ -1.78
UFE1	YOR075W	RCN2	Q12044	265 aa		3.91	□□□□□ -1.78
UFE1	YOR075W	PMS1	P14242	873 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	OLE1	P21147	510 aa	Known RBP	3.9	□□□□□ -1.79
UFE1	YOR075W	RPS2	P25443	254 aa	Known RBP	3.9	□□□□□ -1.79
UFE1	YOR075W	SGF29	P25554	259 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	IMP2'	P32351	346 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	VPS17	P32913	551 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	SEF1	P34228	1148 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	ECM15	P35195	104 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	YNK1	P36010	153 aa	Known RBP	3.9	□□□□□ -1.79
UFE1	YOR075W	UBP11	P36026	717 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	YJL068C	P40363	299 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	SNG1	P46950	547 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	DSD1	P53095	428 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	YGR066C	P53242	292 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	SAM50	P53969	484 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	SHR3	Q02774	210 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	CTI6	Q08923	506 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	DAP1	Q12091	152 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	YPT6	Q99260	215 aa		3.9	□□□□□ -1.79
UFE1	YOR075W	SGS1	P35187	1447 aa		3.89	□□□□□ -1.79
UFE1	YOR075W	YML002W	P0CF17	737 aa		3.89	□□□□□ -1.79
UFE1	YOR075W	PEP5	P12868	1029 aa		3.89	□□□□□ -1.79
UFE1	YOR075W	ART10	P18634	518 aa	Known RBP	3.89	□□□□□ -1.79
UFE1	YOR075W	TIF3	P34167	436 aa	Known RBP	3.89	□□□□□ -1.79
UFE1	YOR075W	FMP46	P36141	133 aa	Known RBP	3.89	□□□□□ -1.79
UFE1	YOR075W	ALG5	P40350	334 aa		3.89	□□□□□ -1.79
UFE1	YOR075W	ALT2	P52892	507 aa		3.89	□□□□□ -1.79
UFE1	YOR075W	RBA50	Q04418	439 aa		3.89	□□□□□ -1.79
UFE1	YOR075W	PDH1	Q12428	516 aa	Known RBP	3.89	□□□□□ -1.79
UFE1	YOR075W	YJR112W-A	Q3E743	109 aa		3.89	□□□□□ -1.79
UFE1	YOR075W	MRP13	P12686	339 aa		3.88	□□□□□ -1.79
UFE1	YOR075W	EST1	P17214	699 aa	Predicted RBP	3.88	□□□□□ -1.79
UFE1	YOR075W	SEC62	P21825	274 aa		3.88	□□□□□ -1.79
UFE1	YOR075W	YHR210C	P38893	341 aa		3.88	□□□□□ -1.79
UFE1	YOR075W	MRX6	P48564	524 aa		3.88	□□□□□ -1.79
UFE1	YOR075W	GLO2	Q05584	274 aa		3.88	□□□□□ -1.79
UFE1	YOR075W	GCN4	P03069	281 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	PHO2	P07269	559 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	REG2	P38232	338 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	CCT4	P39078	528 aa	Known RBP	3.87	□□□□□ -1.79
UFE1	YOR075W	CSM2	P40465	213 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	ALK1	P43633	760 aa	Known RBP	3.87	□□□□□ -1.79
UFE1	YOR075W	IKS1	P47042	667 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	YJR154W	P47181	346 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	IPI3	P53877	555 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	RPM2	Q02773	1202 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	FIN1	Q03898	291 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	IMH1	Q06704	911 aa	Known RBP	3.87	□□□□□ -1.79
UFE1	YOR075W	YOR365C	Q08844	703 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	TIP41	Q12199	356 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	NCE102	Q12207	173 aa	RIP-Chip data	3.87	□□□□□ -1.79	not detected
UFE1	YOR075W	RRI2	Q12348	645 aa		3.87	□□□□□ -1.79
UFE1	YOR075W	CBS1	P14066	229 aa		3.86	□□□□□ -1.79
UFE1	YOR075W	PDA1	P16387	420 aa	Known RBP	3.86	□□□□□ -1.79
UFE1	YOR075W	PEP3	P27801	918 aa		3.86	□□□□□ -1.79
UFE1	YOR075W	IMD4	P50094	524 aa	Known RBP	3.86	□□□□□ -1.79
UFE1	YOR075W	BUD32	P53323	261 aa		3.86	□□□□□ -1.79
UFE1	YOR075W	VPS75	P53853	264 aa		3.86	□□□□□ -1.79
UFE1	YOR075W	SUB1	P54000	292 aa	Known RBP	3.86	□□□□□ -1.79
UFE1	YOR075W	HCR1	Q05775	265 aa	Known RBP	3.86	□□□□□ -1.79
UFE1	YOR075W	YDL057W	Q07379	328 aa		3.86	□□□□□ -1.79
UFE1	YOR075W	BUD21	Q08492	214 aa	Predicted RBP	3.86	□□□□□ -1.79
UFE1	YOR075W	PEP4	P07267	405 aa	Known RBP	3.85	□□□□□ -1.79
UFE1	YOR075W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
UFE1	YOR075W	MRS3	P10566	314 aa		3.85	□□□□□ -1.79
UFE1	YOR075W	SGV1	P23293	657 aa	Known RBP	3.85	□□□□□ -1.79
UFE1	YOR075W	PRO3	P32263	286 aa	Known RBP	3.85	□□□□□ -1.79
UFE1	YOR075W	TCD2	P36101	447 aa	Known RBP	3.85	□□□□□ -1.79
UFE1	YOR075W	YMR087W	Q04299	284 aa		3.85	□□□□□ -1.79
UFE1	YOR075W	RTT103	Q05543	409 aa		3.85	□□□□□ -1.79
UFE1	YOR075W	RLM1	Q12224	676 aa		3.85	□□□□□ -1.79
UFE1	YOR075W	AVL9	Q12500	764 aa		3.85	□□□□□ -1.79
UFE1	YOR075W	YMR230W-A	Q3E7B5	62 aa		3.85	□□□□□ -1.79
UFE1	YOR075W	HSH49	Q99181	213 aa	Predicted RBP	3.85	□□□□□ -1.79
UFE1	YOR075W	APE1	P14904	514 aa		3.84	□□□□□ -1.79
UFE1	YOR075W	YCR007C	P25354	239 aa		3.84	□□□□□ -1.79
UFE1	YOR075W	OCA4	P25366	362 aa		3.84	□□□□□ -1.79
UFE1	YOR075W	PAP1	P29468	568 aa	Known RBP	3.84	□□□□□ -1.79
UFE1	YOR075W	SHP1	P34223	423 aa		3.84	□□□□□ -1.79
UFE1	YOR075W	YBR225W	P38321	900 aa		3.84	□□□□□ -1.79
UFE1	YOR075W	OSH3	P38713	996 aa	Known RBP	3.84	□□□□□ -1.79
UFE1	YOR075W	MSR1	P38714	643 aa		3.84	□□□□□ -1.79
UFE1	YOR075W	DRN1	P53255	507 aa	Known RBP	3.84	□□□□□ -1.79
UFE1	YOR075W	RBG2	P53295	368 aa	Known RBP	3.84	□□□□□ -1.79
UFE1	YOR075W	TOF2	Q02208	771 aa		3.84	□□□□□ -1.79
UFE1	YOR075W	COQ9	Q05779	260 aa		3.84	□□□□□ -1.79
UFE1	YOR075W	VPS38	Q05919	439 aa		3.84	□□□□□ -1.79
UFE1	YOR075W	YTH1	Q06102	208 aa	Predicted RBP	3.84	□□□□□ -1.79
UFE1	YOR075W	CAR1	P00812	333 aa	Known RBP	3.83	□□□□□ -1.8
UFE1	YOR075W	RAD52	P06778	471 aa	Known RBP	3.83	□□□□□ -1.8
UFE1	YOR075W	MTF1	P14908	341 aa	Known RBP	3.83	□□□□□ -1.8
UFE1	YOR075W	HSC82	P15108	705 aa	Known RBP	3.83	□□□□□ -1.8
UFE1	YOR075W	MET8	P15807	274 aa		3.83	□□□□□ -1.8
UFE1	YOR075W	PRD1	P25375	712 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms