RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W YAP1P19880 650 aaKnown RBP3.7□□□□□ -1.82
TRM112YNR046W YCR051WP25631 222 aa3.7□□□□□ -1.82
TRM112YNR046W ADK2P26364 225 aa3.7□□□□□ -1.82
TRM112YNR046W HCS1P34243 683 aa3.7□□□□□ -1.82
TRM112YNR046W BLI1P35727 113 aa3.7□□□□□ -1.82
TRM112YNR046W YKL023WP36103 277 aaKnown RBP3.7□□□□□ -1.82
TRM112YNR046W PHO90P39535 881 aa3.7□□□□□ -1.82
TRM112YNR046W LTP1P40347 161 aa3.7□□□□□ -1.82
TRM112YNR046W ATF1P40353 525 aa3.7□□□□□ -1.82
TRM112YNR046W PSA1P41940 361 aaKnown RBP3.7□□□□□ -1.82
TRM112YNR046W DLD2P46681 530 aaKnown RBP3.7□□□□□ -1.82
TRM112YNR046W YPT11P48559 417 aa3.7□□□□□ -1.82
TRM112YNR046W PYK2P52489 506 aaKnown RBP3.7□□□□□ -1.82
TRM112YNR046W MNP1P53163 194 aaPredicted RBP3.7□□□□□ -1.82
TRM112YNR046W RSC1P53236 928 aa3.7□□□□□ -1.82
TRM112YNR046W CAF130P53280 1122 aaPredicted RBP3.7□□□□□ -1.82
TRM112YNR046W OGG1P53397 376 aaPredicted RBP3.7□□□□□ -1.82
TRM112YNR046W YNL234WP53857 426 aa3.7□□□□□ -1.82
TRM112YNR046W YVH1Q02256 364 aaKnown RBP3.7□□□□□ -1.82
TRM112YNR046W YMR160WQ03823 816 aa3.7□□□□□ -1.82
TRM112YNR046W YDR131CQ03899 556 aa3.7□□□□□ -1.82
TRM112YNR046W ECI1Q05871 280 aa3.7□□□□□ -1.82
TRM112YNR046W YDL218WQ07629 317 aa3.7□□□□□ -1.82
TRM112YNR046W BRR1Q99177 341 aaPredicted RBP3.7□□□□□ -1.82
TRM112YNR046W YRF1-4O13559 1382 aa3.7□□□□□ -1.82
TRM112YNR046W PRP2P20095 876 aaPredicted RBP3.69□□□□□ -1.82
TRM112YNR046W SNC1P31109 117 aa3.69□□□□□ -1.82
TRM112YNR046W SHP1P34223 423 aa3.69□□□□□ -1.82
TRM112YNR046W ARP1P38696 384 aa3.69□□□□□ -1.82
TRM112YNR046W LAG1P38703 411 aa3.69□□□□□ -1.82
TRM112YNR046W FLO5P38894 1075 aa3.69□□□□□ -1.82
TRM112YNR046W XBP1P40489 647 aa3.69□□□□□ -1.82
TRM112YNR046W HXT9P40885 567 aa3.69□□□□□ -1.82
TRM112YNR046W SNG1P46950 547 aa3.69□□□□□ -1.82
TRM112YNR046W SMM1P53720 384 aaKnown RBP3.69□□□□□ -1.82
TRM112YNR046W VPS9P54787 451 aa3.69□□□□□ -1.82
TRM112YNR046W SHR3Q02774 210 aa3.69□□□□□ -1.82
TRM112YNR046W YDL057WQ07379 328 aa3.69□□□□□ -1.82
TRM112YNR046W ATX2Q12067 313 aa3.69□□□□□ -1.82
TRM112YNR046W EDE1P34216 1381 aa3.68□□□□□ -1.82
TRM112YNR046W CBP1P07252 654 aa3.68□□□□□ -1.82
TRM112YNR046W PEP5P12868 1029 aa3.68□□□□□ -1.82
TRM112YNR046W RPL3P14126 387 aaKnown RBP3.68□□□□□ -1.82
TRM112YNR046W PTP1P25044 335 aa3.68□□□□□ -1.82
TRM112YNR046W GCS1P35197 352 aa3.68□□□□□ -1.82
TRM112YNR046W STB6P36085 766 aa3.68□□□□□ -1.82
TRM112YNR046W YHR210CP38893 341 aa3.68□□□□□ -1.82
TRM112YNR046W SOL4P53315 255 aa3.68□□□□□ -1.82
TRM112YNR046W SXM1Q04175 944 aaKnown RBP3.68□□□□□ -1.82
TRM112YNR046W MRPL1Q04599 285 aa3.68□□□□□ -1.82
TRM112YNR046W COQ9Q05779 260 aa3.68□□□□□ -1.82
TRM112YNR046W SSK1Q07084 712 aa3.68□□□□□ -1.82
TRM112YNR046W YLR112WQ12130 139 aa3.68□□□□□ -1.82
TRM112YNR046W TAD3Q9URQ3 322 aa3.68□□□□□ -1.82
TRM112YNR046W ELO2P25358 347 aa3.67□□□□□ -1.82
TRM112YNR046W RAD14P28519 371 aa3.67□□□□□ -1.82
TRM112YNR046W HXT3P32466 567 aaKnown RBP3.67□□□□□ -1.82
TRM112YNR046W APE3P37302 537 aaKnown RBP3.67□□□□□ -1.82
TRM112YNR046W YPK3P38070 525 aa3.67□□□□□ -1.82
TRM112YNR046W LEU5P38702 357 aa3.67□□□□□ -1.82
TRM112YNR046W MBB1P39534 108 aa3.67□□□□□ -1.82
TRM112YNR046W IAH1P41734 238 aa3.67□□□□□ -1.82
TRM112YNR046W ART5P53244 586 aaKnown RBP3.67□□□□□ -1.82
TRM112YNR046W YNL181WP53878 407 aa3.67□□□□□ -1.82
TRM112YNR046W RPA49Q01080 415 aaPredicted RBP3.67□□□□□ -1.82
TRM112YNR046W CIK1Q01649 594 aa3.67□□□□□ -1.82
TRM112YNR046W KAP120Q02932 1032 aa3.67□□□□□ -1.82
TRM112YNR046W RCF1Q03713 159 aa3.67□□□□□ -1.82
TRM112YNR046W ERB1Q04660 807 aaKnown RBP3.67□□□□□ -1.82
TRM112YNR046W GSH2Q08220 491 aa3.67□□□□□ -1.82
TRM112YNR046W THP1Q08231 455 aa3.67□□□□□ -1.82
TRM112YNR046W YPR089WO13585 888 aa3.66□□□□□ -1.82
TRM112YNR046W PEP4P07267 405 aaKnown RBP3.66□□□□□ -1.82
TRM112YNR046W SPS4P09937 338 aa3.66□□□□□ -1.82
TRM112YNR046W PMS1P14242 873 aa3.66□□□□□ -1.82
TRM112YNR046W CLB1P24868 471 aa3.66□□□□□ -1.82
TRM112YNR046W BUD14P27637 709 aa3.66□□□□□ -1.82
TRM112YNR046W TFB1P32776 642 aa3.66□□□□□ -1.82
TRM112YNR046W TUL1P36096 758 aa3.66□□□□□ -1.82
TRM112YNR046W NTC20P38302 140 aaPredicted RBP3.66□□□□□ -1.82
TRM112YNR046W LRP1P38801 184 aaKnown RBP3.66□□□□□ -1.82
TRM112YNR046W YMR124WP39523 943 aaKnown RBP3.66□□□□□ -1.82
TRM112YNR046W ATG27P46989 271 aa3.66□□□□□ -1.82
TRM112YNR046W BNA3P47039 444 aaKnown RBP3.66□□□□□ -1.82
TRM112YNR046W AIM22P47051 409 aa3.66□□□□□ -1.82
TRM112YNR046W FMS1P50264 508 aa3.66□□□□□ -1.82
TRM112YNR046W BNI5P53890 448 aaKnown RBP3.66□□□□□ -1.82
TRM112YNR046W HEF3P53978 1044 aaKnown RBP3.66□□□□□ -1.82
TRM112YNR046W LGE1Q02796 332 aaKnown RBP3.66□□□□□ -1.82
TRM112YNR046W ROY1Q04847 553 aa3.66□□□□□ -1.82
TRM112YNR046W RBS1Q05672 457 aaKnown RBP3.66□□□□□ -1.82
TRM112YNR046W NCE102Q12207 173 aaRIP-Chip data3.66□□□□□ -1.82not detected
TRM112YNR046W SNU66Q12420 587 aaPredicted RBP3.66□□□□□ -1.82
TRM112YNR046W AFI1Q99222 893 aa3.66□□□□□ -1.82
TRM112YNR046W RAV1P47104 1357 aa3.65□□□□□ -1.82
TRM112YNR046W HSP82P02829 709 aaKnown RBP3.65□□□□□ -1.83
TRM112YNR046W RHO2P06781 192 aa3.65□□□□□ -1.83
TRM112YNR046W COR1P07256 457 aa3.65□□□□□ -1.83
TRM112YNR046W YER190C-BP0CX94 160 aa3.65□□□□□ -1.83
TRM112YNR046W YEL077W-AP0CX95 160 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms